Protein

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Genbank accession
UJH95983.1 [GenBank]
Protein name
putative tail spike protein
RBP type
TSP
Evidence RBPdetect2
Probability 0,93
Protein sequence
MSTMNGGAGGILVLPGQNGGTAGNKPTSKPQPPSLQDIISGSEKTVLFALITEFLKLNPDAVSAADPKVIKAAVIEYLDQNPITAGLDATAVQGLINTSIQAIRQGHTDTEIQNIINTFIATNPPSFNDAVKKYLKDNPVSGGGGLGEDQINDLIELYIAANGYNNDASDINNLIQGWIASHPISATIDPAVLTKAITDYLKANPVVPDSDAVEAAVTAYFNAHPPAAGVSPAQMTKALSDLLASTDFTTAVVASIKAEEANLLAQDAFKNAVNGMITAALTAKDFTADITAAINQYFSTHPQRTDAQVKALVAAWIKDNPQGLSQSEVEAAIVAYLTANPPGDVSAADIEAAVNTYLGAHPPSGGVREFASFDLLCKAKPSKEGERVWLANHNPRLPAGNMAQGQGYFVGHIVTSSMKYRTPDGGLFAGVTTDKTYFWIRDISLEELNVTHFGAMGVVGVKSDNRAGAIDDSPALIAMYDCLKSAQTKAIFPNSEMAPVKFPAGAYMINPVDLTTRGAKTSDAKMLEARKKAIWTASRKPWDGNKFGQGVGTGGANVSKWENVDVDAVKNSTNADIKKLYVEFPASENHNGYEQAGFFGMTGPSVPYGRAPQVTIFSNKQQDSYVIDLKHSLCVIQGIEFDGEIKEGFNWNTDATKGPINGPAFTGTIAGGNLVVPSAPSNNQGFLHNCATPASITV
Physico‐chemical
properties
protein length:698 AA
molecular weight: 73618,91910 Da
isoelectric point:5,15452
aromaticity:0,07450
hydropathy:-0,14269

Domains

Domains [InterPro]
DC_0717
ATT
338–481
DC_0717 DC_0716
UJH95983.1
1 698
Architecture
ATT
STR
ATT 338-481 | STR 493-694 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UJH95983.1
1 698
Domain Start End Length (AA) Confidence
N-terminal 1 471 471 0,9968
Central domain 472 687 217 0,9909
C-terminal 688 698 10 0,0709
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-471
Central
472-687
C-terminal
688-698

Taxonomy

  Name Taxonomy ID Lineage
Phage Pantoea phage Nafs113
[NCBI] 		2894291 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pantoea agglomerans
[NCBI] 		549 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UJH95983.1 [NCBI]
Genbank nucleotide accession
OK570186 [NCBI]
CDS location
range 39850 -> 41946
strand +
CDS
ATGTCAACAATGAATGGCGGCGCGGGTGGCATCCTGGTTTTACCCGGCCAGAACGGCGGGACCGCAGGCAATAAGCCGACCAGCAAACCGCAACCACCCAGCCTTCAGGACATCATTAGCGGGTCTGAAAAGACCGTCCTTTTTGCGCTTATCACTGAATTCCTTAAACTGAATCCCGACGCAGTCAGCGCTGCTGACCCGAAAGTGATCAAAGCGGCTGTTATTGAATATCTGGACCAGAATCCGATCACTGCTGGTCTGGATGCTACGGCTGTCCAGGGGTTGATCAACACGTCAATTCAGGCAATCCGACAGGGACACACCGACACTGAAATCCAGAACATCATTAACACCTTCATCGCGACGAATCCGCCCAGCTTCAATGATGCGGTTAAAAAGTATCTGAAGGATAACCCGGTATCGGGTGGCGGTGGTCTGGGCGAAGATCAGATTAACGATCTGATTGAACTTTACATCGCCGCGAATGGCTACAACAACGACGCGAGCGACATTAATAATCTGATTCAGGGCTGGATTGCCTCGCATCCTATTTCGGCCACCATCGATCCTGCGGTGCTGACGAAGGCGATCACTGATTACCTGAAAGCAAACCCGGTCGTTCCTGATTCAGACGCTGTTGAAGCCGCTGTCACGGCCTATTTCAATGCCCATCCTCCAGCCGCTGGCGTCAGCCCTGCGCAAATGACGAAGGCGCTTTCGGACCTGCTGGCATCGACTGACTTCACCACGGCTGTTGTTGCATCCATTAAGGCTGAAGAAGCAAACCTGTTAGCCCAGGATGCATTCAAAAATGCTGTTAACGGGATGATCACTGCCGCGCTGACCGCGAAGGATTTCACCGCTGACATTACCGCCGCCATCAACCAGTATTTCAGCACGCATCCGCAGCGTACTGACGCGCAGGTGAAAGCGCTGGTGGCAGCGTGGATCAAAGATAACCCGCAAGGCTTAAGCCAGTCAGAAGTCGAAGCCGCCATCGTGGCATACCTGACCGCTAACCCGCCAGGTGATGTCAGCGCCGCCGATATTGAAGCCGCTGTGAACACCTATCTGGGCGCGCATCCGCCATCTGGTGGTGTGCGTGAATTCGCGTCGTTTGACCTGCTGTGTAAGGCTAAGCCGTCGAAAGAGGGTGAACGCGTCTGGCTGGCGAATCACAACCCACGGTTACCAGCTGGCAACATGGCACAAGGTCAGGGCTACTTCGTCGGCCACATTGTGACTTCATCAATGAAATATCGAACCCCGGATGGCGGTTTATTCGCTGGTGTGACCACGGATAAAACCTACTTCTGGATCCGCGACATTTCACTTGAAGAATTGAATGTTACCCACTTCGGCGCGATGGGTGTGGTAGGGGTGAAAAGCGATAACCGCGCTGGCGCTATTGATGACAGCCCGGCACTGATCGCGATGTATGACTGTCTGAAGTCTGCCCAGACTAAAGCCATTTTCCCGAACTCGGAAATGGCCCCGGTTAAATTCCCTGCTGGTGCGTACATGATCAACCCGGTTGACCTGACCACCCGTGGTGCGAAAACGTCTGATGCCAAAATGCTGGAAGCCCGTAAAAAGGCGATCTGGACAGCGTCCCGCAAACCATGGGATGGCAATAAGTTCGGACAGGGCGTCGGCACCGGTGGCGCGAACGTGTCGAAGTGGGAAAACGTCGACGTGGACGCGGTGAAGAACAGCACGAATGCAGACATCAAAAAACTGTATGTCGAATTCCCAGCGTCAGAAAACCATAACGGCTATGAACAGGCTGGCTTCTTCGGCATGACCGGCCCGTCGGTGCCGTATGGTCGCGCGCCGCAGGTGACGATCTTCAGTAACAAACAGCAGGACAGTTACGTCATCGACCTGAAGCACTCGCTGTGTGTGATTCAGGGCATCGAATTTGATGGCGAGATTAAAGAAGGGTTCAACTGGAACACCGACGCGACGAAAGGCCCGATTAACGGTCCTGCGTTCACTGGAACCATTGCTGGCGGTAATCTGGTCGTACCATCTGCCCCATCGAATAATCAGGGCTTTCTGCATAACTGCGCAACTCCGGCCAGTATTACAGTGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
b152d4a7c8ac82ddb6af18394b0ac211a7316390902d6a38f3fe602d92c2931b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4649
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Pantoea phage Nafs113 Dislers,A., Zrelovs,N. and Kazaks,A. 2012-10-15 — GenBank