Protein

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Genbank accession
XRM24608.1 [GenBank]
Protein name
tail spike protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
Protein sequence
MTQRVVNYTYGTGNPVLPDGSIDVRDGIDNLQSFDIFMNADEDTYNQRDGEIVQTVAGAIRSIGFKPGAGDFTTGFTVMPGQRDYAWYDPVSHNWYSYLGVIPTGGYVVAPTTNPVGNSDWAPRTDQTGYTLLRSDLSAPNGVDLVGGAAKQSDLSELSSSVSQNERRNIDNIAELRLTTPKGLGEVVYVRSSIDTPAGVYGYFGGGHFAAYDNTHANIDDSGVFIGSPHPTLKWQRINFTEYDMRFWGLITDIASFDNAPAITLATDFAKARKVLLHAPAGNVYTSEMIPVYDNMGITGQGAAEQTVFYKTSNNAFAYKANGNTAFTVDALVGFVPKKSVAGGSMVDSQTHTACPHLSKCMFRRNGLTEANYDYTRPTVGLFLGSMAGGCVSDVTVEGAYNAIQGWTCYLATIERLFANNFPGKGFTGFGLQAYSAAPVGHKTAGTSLDMRLVSIRGYQIGFEMIGQQYTSMTCCTVEECQPLFGEPNAIAFRFVNPYSITMDSCATEGVTGTQISVIHGSPVSYKSSLVVQNYLAIDQRNPVSPTTQFIFIDSGGIGTLNVTFIGGDLTRNTIQPNLIAGTVSGAGAKAIKIGAGGLVLTPLAGGVFTDLA
Physico‐chemical
properties
protein length:613 AA
molecular weight: 65517,68070 Da
isoelectric point:5,10144
aromaticity:0,10440
hydropathy:-0,07406

Domains

Domains [InterPro]
DC_1559
ATT
1–170
DC_1559 IPR011050
DC_0717
ATT
125–278
DC_0717
XRM24608.1
1 613
Architecture
ATT
STR
ATT 1-278 | STR 279-590 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XRM24608.1
1 613
Domain Start End Length (AA) Confidence
N-terminal 1 258 258 0,9946
Central domain 259 590 333 0,9780
C-terminal 591 613 22 0,8522
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-258
Central
259-590
C-terminal
591-613

Taxonomy

  Name Taxonomy ID Lineage
Phage Aeromonas phage Avpx2
[NCBI] 		3411887 No lineage information
Host Aeromonas veronii
[NCBI] 		654 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Aeromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRM24608.1 [NCBI]
Genbank nucleotide accession
PV296136.1 [NCBI]
CDS location
range 31553 -> 33394
strand -
CDS
ATGACACAGCGCGTTGTAAATTACACATATGGAACTGGAAATCCAGTGCTTCCTGATGGTTCTATCGATGTTCGCGACGGTATCGATAACCTTCAATCTTTCGATATTTTCATGAACGCAGATGAGGATACCTATAACCAGCGTGATGGAGAAATTGTACAGACAGTTGCTGGGGCAATTCGAAGTATAGGTTTTAAACCTGGGGCTGGCGATTTCACTACTGGTTTCACTGTCATGCCTGGTCAACGCGATTATGCGTGGTATGACCCAGTAAGTCATAATTGGTATTCATATCTCGGTGTCATTCCAACTGGCGGGTATGTTGTAGCACCGACAACCAATCCAGTTGGTAATTCTGATTGGGCACCGAGGACTGACCAAACTGGATATACATTATTGCGGAGTGATTTATCTGCACCTAATGGAGTTGACCTTGTAGGCGGGGCCGCTAAACAATCTGATTTAAGCGAGCTGTCATCATCTGTATCGCAAAATGAACGACGCAACATTGATAACATTGCTGAGCTTAGACTAACTACACCTAAAGGTCTGGGTGAAGTGGTTTATGTGAGATCGTCAATAGACACCCCAGCAGGAGTATATGGCTATTTCGGAGGAGGTCATTTCGCAGCGTACGACAATACACATGCTAATATTGACGACAGTGGCGTATTCATTGGTTCACCTCACCCGACGTTGAAATGGCAGCGCATCAACTTCACCGAATATGATATGCGGTTCTGGGGGCTGATTACAGACATAGCCTCTTTCGATAACGCACCAGCAATAACATTGGCAACTGATTTTGCCAAGGCGCGCAAGGTTTTGCTGCATGCGCCAGCCGGCAACGTCTACACCTCAGAGATGATCCCTGTTTATGACAACATGGGCATCACCGGACAAGGGGCTGCCGAGCAAACCGTATTCTATAAGACCAGCAATAACGCATTTGCCTACAAAGCAAATGGCAACACCGCATTCACCGTGGATGCGCTGGTCGGGTTCGTGCCGAAGAAGTCAGTGGCCGGCGGTAGTATGGTAGACAGTCAAACCCACACGGCCTGCCCGCATCTATCCAAATGCATGTTCAGGCGTAACGGTTTGACCGAGGCGAACTACGACTATACGCGCCCAACCGTCGGACTGTTCCTGGGCAGCATGGCCGGAGGTTGTGTCAGCGATGTCACTGTCGAAGGTGCCTACAATGCAATCCAAGGTTGGACCTGCTATTTGGCAACCATAGAGCGACTATTTGCCAACAACTTTCCCGGCAAGGGATTTACCGGGTTTGGTCTGCAAGCCTACTCGGCGGCGCCGGTCGGCCATAAAACGGCAGGAACATCTCTAGACATGAGACTGGTAAGCATCCGCGGTTATCAGATCGGTTTTGAAATGATCGGGCAACAATACACTTCAATGACCTGCTGCACCGTCGAGGAATGCCAACCGCTCTTCGGAGAGCCCAATGCAATTGCATTCCGGTTTGTAAACCCATACAGCATCACAATGGATTCCTGCGCCACTGAGGGTGTGACAGGTACTCAGATCAGCGTTATACATGGCAGCCCAGTATCGTATAAGTCGTCGCTGGTGGTGCAGAACTATTTAGCTATAGACCAGCGCAACCCAGTAAGCCCAACAACTCAGTTTATCTTCATTGATAGCGGCGGAATTGGAACACTGAATGTGACCTTTATTGGCGGTGACCTAACTAGGAATACCATACAGCCAAACCTGATTGCAGGGACGGTAAGTGGTGCTGGCGCTAAAGCAATTAAGATTGGCGCTGGCGGGTTGGTTCTCACCCCTCTTGCTGGCGGCGTGTTCACTGATCTCGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
19850b9aa6e3d99e2353f4ac54b92c06ff1ab9dae1762f7de8874a356aa4499b
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7659
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50