Protein

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Genbank accession
XCO69240.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MYYSLMRESKVIVEYDGRAFHFDALSNYDIQTSYEEFKTLRRTVHRRTNYADSIINAQTPSSISLAVNFSNTLTEANFFEWLGFDRKGNTFLLPLYSSNIEPIMFNIYIVNKDNNCVYFENCYVSTVDFSLDKNIPILNVGIESGKFSEVSTYREAASIIQGEVMSYSPVIASTNGSILPGLISASLSFQQQCSWREDKSVFDINKIYNNKRAYVNEMNASATISLYYLKRFAGDMVYNIEPETDLPLNIRNNNISIDFPSARITKRLDFSDVYRVEWDIIPTASSDPVRIDFFGEIKK
Physico‐chemical
properties
protein length:299 AA
molecular weight: 34359,28600 Da
isoelectric point:5,05557
aromaticity:0,13378
hydropathy:-0,24247

Domains

Domains [InterPro]
IPR056389
ATT
1–298
IPR056389
XCO69240.1
1 299
Architecture
ATT
ATT 1-298 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XCO69240.1
1 299
Domain Start End Length (AA) Confidence
N-terminal 1 287 287 0,6100
Central domain 288 288 2 0,8220
C-terminal 289 299 10 0,4945
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-287
Central
288-288
C-terminal
289-299

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_Sen_TUMS_E3
[NCBI] 		3229529 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XCO69240.1 [NCBI]
Genbank nucleotide accession
PP941779 [NCBI]
CDS location
range 22360 -> 23259
strand +
CDS
ATGTACTACTCTCTAATGAGAGAGTCAAAAGTTATAGTTGAGTATGATGGTAGGGCATTTCATTTTGATGCCCTATCAAACTATGATATACAGACTTCCTACGAGGAATTCAAGACTCTTCGTAGGACTGTTCATCGTAGAACTAACTATGCAGACTCTATTATAAATGCTCAAACCCCCTCTTCTATCTCTCTAGCAGTAAATTTCAGTAATACTCTTACTGAGGCTAACTTCTTTGAATGGTTAGGTTTTGATAGAAAAGGTAATACTTTCTTACTCCCACTATATAGTAGTAATATTGAACCTATTATGTTCAATATCTATATAGTAAATAAAGATAATAACTGTGTATATTTTGAAAACTGTTATGTATCTACGGTAGATTTTTCTTTAGATAAGAACATACCAATTCTTAATGTTGGTATTGAATCGGGAAAATTTTCCGAAGTATCTACGTATAGAGAAGCAGCTTCTATTATACAGGGTGAAGTAATGTCTTACAGCCCAGTAATAGCTTCTACTAATGGCAGCATCTTACCCGGTCTTATTTCTGCCTCTTTATCTTTCCAACAGCAGTGCTCTTGGAGAGAAGATAAGAGTGTTTTTGATATAAATAAAATTTATAATAATAAAAGAGCTTATGTAAATGAAATGAATGCTTCGGCAACCATTTCTCTATATTACTTAAAACGTTTTGCAGGAGATATGGTTTACAATATCGAACCGGAGACAGATCTACCTTTAAATATAAGAAATAATAATATTTCTATAGATTTTCCTTCAGCACGTATTACAAAACGCCTAGATTTCTCAGATGTGTATAGAGTTGAGTGGGATATTATACCTACTGCTTCTTCAGACCCAGTGAGAATAGATTTCTTTGGAGAAATTAAAAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
006adbf63015bea47de204bf9003b7a569cfcf13453f8d1ffea6fffc02832270
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8231
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation, characterization, and genome analysis of a new Salmonella phage vB_Sen_TUMS_E3 Torkashvand,N., Kamyab,H., Shahverdi,A.R. and Sepehrizadeh,Z. 2023-04-25 — GenBank