Protein

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Genbank accession
YP_011712944.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,96
Protein sequence
MSRNLMPKSGAMAPYVVVNRDAAVAGVFSVDGEAGAVVLTSKYLQITKYTTDKAATDASINSINESIGNINTALGGINTTLGTKAAKGANNDITELNALTKAITLTQGGTGATTLEGAKKALQVERLRQQSNGTFIVSPNEKYSLFIYDSGDFGLLDNSTAAVQALKVAFGGTGGTTPKAARKNLNVPVGAWAEKIADGEDVLNYIAVAGQSGYYSSGELIVNGPPKQQGWWAYNFHCHGVDINGAAQYGTLKATGALGSTWINVLDGTDNWRGWQEQFNAQSIVQFSNGGTGATSKDGARTNLDIDRFKQSATETMVYAPGSGSRITARPNGEWGTWRDDTGTWVPLAIAAGGTGANSADQARKNLELTEWNLLSSMDAKYPNGFNFDTLAINSKFTVPPTGGSIVGTRPYQQINGLEDAWFFLETLVHPDPNYRMQRATMFTGAWKGSVSVRIMEGGTWGVWQQAHGALGQLVNAISNRGAIRVQGAASGESGSLISGAISGGSFTDWRSRPTGVLVEHTGLDSASSVFKSVLWGVDWLAGMDVVGWSAGGAQLNMYCRGAEFRFDSAGNAVGGNWVSSSDIRMKADLKEIENARDKVKSLVGYTYYKRNTLKEEKDTVYSTEAGVIAQDVQSVLPEAVYKIEPQKEDSMLGVSHAGVNALLVNAFNELNEVVEKQQQEIDELKKLVKQLLAK
Physico‐chemical
properties
protein length:695 AA
molecular weight: 74179,04450 Da
isoelectric point:5,74815
aromaticity:0,08489
hydropathy:-0,26403

Domains

Domains [InterPro]
DC_0195
STR
2–695
DC_0195
IPR030392
CHP
582–682
IPR030392
IPR030392
CHP
582–642
IPR030392 Coil
YP_011712944.1
1 695
Architecture
STR
STR 2-695
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage smaug
[NCBI] 		2713322 Uroviricota > Caudoviricetes > Demerecviridae > Epseptimavirus > Epseptimavirus smaug
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_011712944.1 [NCBI]
Genbank nucleotide accession
NC_102114.1 [NCBI]
CDS location
range 37488 -> 39575
strand +
CDS
ATGTCACGTAATTTAATGCCTAAATCTGGCGCAATGGCGCCTTACGTAGTAGTTAACAGAGACGCTGCAGTTGCTGGTGTTTTCTCTGTCGATGGAGAGGCTGGTGCTGTTGTACTAACTTCCAAATATCTACAAATTACAAAATATACTACTGATAAAGCTGCTACTGATGCATCTATTAATAGTATTAATGAATCAATTGGTAATATTAATACTGCATTAGGTGGTATTAATACTACTTTAGGTACTAAAGCTGCTAAAGGTGCTAATAACGATATTACAGAATTAAATGCACTGACTAAAGCTATTACACTTACCCAGGGGGGTACTGGTGCTACTACGTTAGAGGGTGCTAAGAAGGCCTTACAAGTTGAACGCCTTCGCCAACAGAGTAATGGAACTTTTATTGTATCTCCTAATGAGAAATATTCTTTATTTATATATGATAGTGGAGATTTTGGTCTACTTGATAATTCTACTGCAGCAGTACAAGCATTAAAAGTTGCATTTGGTGGTACTGGAGGAACTACTCCAAAAGCAGCAAGAAAAAATCTTAATGTTCCGGTTGGCGCCTGGGCTGAAAAAATTGCTGATGGGGAAGATGTTCTAAATTATATTGCGGTTGCAGGTCAAAGCGGGTATTATTCATCTGGTGAATTAATAGTTAATGGACCCCCTAAGCAACAAGGTTGGTGGGCATATAACTTCCACTGTCATGGTGTGGATATTAACGGAGCTGCTCAGTATGGTACACTAAAAGCTACCGGAGCACTTGGAAGTACTTGGATTAATGTTCTAGATGGTACGGACAATTGGAGAGGGTGGCAAGAGCAATTTAATGCCCAGTCTATCGTACAGTTTTCAAATGGAGGTACTGGTGCTACTTCTAAAGATGGTGCGAGAACTAACCTGGACATTGACAGATTCAAACAAAGTGCTACTGAGACTATGGTATACGCTCCCGGAAGTGGATCTAGAATCACTGCTAGACCTAACGGGGAATGGGGTACATGGAGAGACGATACAGGTACTTGGGTTCCTTTGGCTATTGCAGCTGGAGGTACGGGAGCTAATTCTGCCGACCAAGCTAGAAAAAATCTAGAATTAACAGAGTGGAACCTCTTGTCCTCTATGGACGCTAAATACCCAAATGGGTTTAATTTTGACACTCTTGCTATAAATAGTAAGTTTACTGTTCCACCTACTGGGGGAAGTATTGTTGGTACTCGACCATACCAACAAATAAACGGGCTAGAAGACGCGTGGTTTTTCTTAGAAACTCTAGTACACCCAGATCCTAACTATAGAATGCAAAGAGCCACCATGTTTACAGGAGCTTGGAAAGGTTCAGTAAGCGTACGTATTATGGAGGGTGGTACTTGGGGTGTATGGCAACAAGCCCATGGAGCTTTGGGGCAATTAGTTAATGCAATATCTAATCGAGGTGCCATTAGAGTACAGGGGGCTGCAAGTGGGGAATCTGGGTCACTAATAAGTGGTGCTATTAGTGGTGGCTCATTTACTGATTGGAGATCAAGACCTACAGGAGTACTAGTAGAACATACTGGATTGGATTCTGCATCTTCTGTATTTAAAAGCGTACTGTGGGGTGTAGACTGGTTAGCAGGTATGGATGTAGTAGGCTGGAGTGCCGGCGGTGCACAGTTAAACATGTATTGCAGGGGGGCTGAGTTTCGTTTTGATAGCGCTGGTAATGCTGTTGGTGGTAACTGGGTAAGCAGTTCTGATATTCGCATGAAAGCCGATCTTAAGGAAATTGAGAATGCTCGTGATAAGGTTAAATCTCTAGTAGGCTATACATATTATAAGAGAAATACTCTTAAAGAGGAAAAAGATACTGTTTACAGTACTGAGGCTGGTGTTATCGCTCAAGATGTGCAATCTGTTCTCCCAGAAGCAGTGTATAAGATTGAGCCACAAAAAGAAGACAGTATGCTTGGTGTCTCCCATGCAGGTGTCAATGCTCTTCTAGTTAATGCTTTTAATGAACTTAACGAAGTTGTTGAAAAGCAGCAACAAGAAATTGATGAACTTAAGAAATTGGTAAAACAACTTCTTGCTAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d7c904a2967f21fedf0c1f2611c49f9ff0e60c27b6a7a9fa3e870be1010f3b49
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7369
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A New High-Throughput Screening Method for Phages: Enabling Crude Isolation and Fast Identification of Diverse Phages with Therapeutic Potential Olsen,N.S., Hendriksen,N.B., Hansen,L.H. and Kot,W. 2020 — GenBank