Protein

View in Explore
Genbank accession
QZE55971.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MVEKVDITLLKTNASGPVVATQGGVSVNTAEDDSTLNGAFDQQTGVLAINIPTIGKLQISGLPTIHSIGYGPVGPDGGAGRDGIDGLMGTNGKRGTDGCPGPRGGDGLPGKQGYVGLRGPAGPTGPTGSTGAAGNPGVVAIYIQDTDPSIDNEVPPGGIWVRP
Physico‐chemical
properties
protein length:163 AA
molecular weight: 16052,69300 Da
isoelectric point:4,58807
aromaticity:0,03067
hydropathy:-0,20307

Domains

Domains [InterPro]
DC_1829
ATT
1–75
DC_1829 IPR008160
QZE55971.1
1 163
Architecture
ATT
STR
ATT 1-75 | STR 89-137 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage pEp_SNUABM_52
[NCBI] 		2869561 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Erwinia amylovora
[NCBI] 		552 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QZE55971.1 [NCBI]
Genbank nucleotide accession
MZ443769.1 [NCBI]
CDS location
range 72433 -> 72924
strand -
CDS
GTGGTTGAAAAGGTTGATATAACGCTACTCAAGACAAATGCTTCTGGTCCTGTAGTAGCTACTCAAGGCGGTGTGTCTGTAAACACAGCCGAAGATGATAGTACGCTTAATGGTGCTTTCGATCAGCAGACGGGCGTACTCGCAATAAACATTCCGACCATCGGCAAGTTGCAAATCAGTGGACTGCCTACTATTCACAGCATCGGCTATGGTCCTGTAGGTCCTGACGGCGGCGCTGGTCGTGATGGTATTGACGGTCTGATGGGTACTAACGGTAAGCGTGGTACTGACGGTTGTCCCGGCCCTCGTGGCGGTGACGGTCTGCCGGGCAAGCAAGGCTATGTTGGTCTACGTGGTCCAGCAGGTCCTACAGGCCCAACCGGTTCTACTGGCGCTGCGGGTAATCCCGGTGTAGTAGCAATCTATATTCAAGATACGGATCCGTCTATCGACAATGAGGTTCCACCTGGCGGTATTTGGGTGAGGCCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c18316ef381b9a53d13f81e115931b2f5e9ef59106a826629181bbe761d0083d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6097
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Erwinia phage pEp_SNUABM_52 Kim,S.G. and Park,S.C. 2021-01-07 — GenBank