Protein

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UniProt accession
A0A8S5NP81 [UniProt]
Protein name
Chondroitinase B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,86
Protein sequence
MNKGKKFIAALFCVMLLVGLCAGMTANAAVESVTEVSDLKYAIERANDGDTILFFGTITAVSDLGSPKKHVILKRGTAESCLVTTKGVSGSIQNITFDGAGMVSSQPILKIQGDYAIQNCIFEQCGDVNNASSSNTIGGAVCVNFGNPCFSDCTFNSNNAIVGGHVAIIGNADVSFRNCTMKNGHSGSGGAISVAGSAKCDIEGCTITENETRDYGGGIANAGNIHIRKTKLFNNTTVNGGADIATKIGGTTVLEDSLDELQTLFEEDNIFVRGWVCDYDFEESVFIPDVEPTEENLLKLDFEVIQPEEPDQPTEPGTGEPTDPKQPDQPSQPEPTEPGESSPSTDQPTDDKPSTDDSGKEPDTPNNDAPGQSTLSNSTIDNSTTTGDTITNNSSSSSIDNSTSSNHESTTTDNSRHSNTTDSNNTSTVNNYYTQAETPTSSDKQDEMQTIVIPVGNAGSSEPIEQTITIQSPDGSTSGNWDGATLNINVNLSSDGAEQHNTATNTSISGITWYQAAVLCLLTAIAVCLLKRH
Physico‐chemical
properties
protein length:533 AA
molecular weight: 56125,57130 Da
isoelectric point:4,24305
aromaticity:0,04878
hydropathy:-0,42195

Domains

Domains [InterPro]
IPR011050
STR
17–252
IPR011050
IPR011050
STR
17–245
IPR011050
IPR012334
STR
26–274
IPR012334
A0A8S5NP81
1 533
Architecture
STR
STR 17-274 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5NP81
1 533
Domain Start End Length (AA) Confidence
N-terminal 1 33 33 0,1928
Central domain 34 512 480 0,5566
C-terminal 513 533 20 0,8310
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-33
Central
34-512
C-terminal
513-533

Taxonomy

  Name Taxonomy ID Lineage
Phage Myoviridae sp. ctdWz11
[NCBI] 		2826671 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAD96542.1 [NCBI]
Genbank nucleotide accession
BK015218 [NCBI]
CDS location
range 7103 -> 8704
strand +
CDS
ATGAACAAAGGAAAAAAGTTTATAGCAGCATTGTTTTGCGTTATGCTGCTTGTAGGGTTGTGCGCTGGAATGACTGCAAATGCCGCAGTTGAAAGCGTAACAGAGGTGAGTGATCTAAAATACGCAATCGAACGGGCGAATGATGGGGATACCATTCTTTTCTTTGGAACAATAACCGCTGTTTCTGATCTTGGCAGCCCCAAAAAGCACGTAATTCTAAAGCGTGGAACTGCTGAAAGCTGCTTAGTGACTACAAAAGGAGTGTCCGGCAGTATTCAGAATATTACATTTGATGGGGCGGGTATGGTTTCTTCACAACCAATACTAAAAATTCAAGGGGATTATGCAATTCAAAATTGCATTTTTGAGCAATGCGGCGATGTGAATAATGCTTCAAGTTCCAATACTATAGGCGGGGCGGTATGTGTTAATTTTGGGAATCCTTGTTTTTCTGATTGTACTTTTAATAGCAATAATGCAATTGTGGGCGGTCATGTGGCTATCATCGGTAATGCCGATGTATCATTTCGGAATTGTACCATGAAGAACGGTCATAGCGGTTCAGGTGGCGCAATATCTGTTGCCGGAAGTGCAAAATGCGATATTGAAGGATGTACGATCACCGAAAATGAAACCCGTGACTATGGCGGTGGTATTGCTAATGCTGGCAACATTCATATCAGGAAAACAAAGCTGTTCAATAATACAACTGTCAATGGTGGTGCAGATATTGCAACCAAAATCGGCGGCACAACAGTTTTAGAAGATTCCCTTGACGAGTTGCAAACGCTATTTGAGGAAGATAATATTTTCGTTCGTGGCTGGGTATGCGATTATGATTTTGAAGAAAGTGTTTTTATCCCGGATGTTGAACCCACAGAGGAAAATCTGTTGAAACTGGATTTTGAGGTAATACAGCCGGAAGAACCCGATCAGCCCACCGAACCGGGTACGGGTGAGCCAACAGACCCTAAACAGCCGGATCAACCTTCACAGCCTGAACCAACCGAACCGGGGGAATCTAGCCCTTCAACGGATCAGCCGACAGATGATAAACCGTCAACAGATGATTCCGGGAAGGAGCCTGACACCCCAAATAATGATGCACCGGGACAAAGCACACTTTCTAATTCAACGATTGATAACAGCACAACCACGGGCGACACTATTACTAATAATAGTTCAAGCAGTTCAATAGACAATTCAACCAGTTCAAACCACGAAAGCACTACAACCGATAATTCCAGACATTCAAATACAACGGATTCAAATAACACTTCTACGGTCAACAATTACTATACACAGGCAGAAACACCGACTTCCAGCGATAAGCAGGATGAAATGCAGACAATCGTTATTCCTGTTGGAAATGCTGGAAGCAGCGAACCCATAGAACAAACAATAACAATTCAAAGCCCGGACGGAAGTACAAGCGGGAATTGGGATGGTGCAACACTAAATATCAATGTGAACCTTAGTTCAGACGGTGCAGAACAGCATAATACCGCAACCAACACTTCAATAAGTGGAATTACATGGTATCAAGCAGCGGTATTGTGCTTGCTAACAGCTATTGCTGTTTGTTTGTTAAAACGGCACTGA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0044423 virion component Cellular Component IEA:UniProtKB-KW (UniProt)
GO:0051701 biological process involved in interaction with host Biological Process IEA:UniProtKB-ARBA (UniProt)
GO:0019058 viral life cycle Biological Process IEA:UniProtKB-ARBA (UniProt)

Tertiary structure

PDB ID
3832bc7c5c15ef178b0e6d9149812259fe3d93580d3a9bac3837fc7711f7237b
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6729
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50