Protein

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Genbank accession
XHH73896.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
Protein sequence
MNYPNPPRPEITTKEKPAFKEITSELLRELENALNDATLWKEQVNLSLKGVKRILEVITGIDFFQKANEIDERLRGIVKWLENSSDGLQTKMKEYEHFFSEFNTSMKSNEQEVTNTLNANTENIKSEIKKLENQIVETATKLLTSYQIFLNQARENATTQINTKETQAITNINEAKTNANNEISNNQTQAINNINEAKVSANNEINTNKQEVLNNITQEKNQATTEITEAKKTAFNELLETLKPKFSGLFVGAYYIRNVIYIQGGWEQKVKDLSDYTLEKSKKYEIEVFFQFVSAKIVEKDLYFGLKVQEGFLKESIQKLTHKYVSQIYHAKLLIENVSGVLSLYHGYFYGNINYFNESLITSIRELPNDTIISKVSNGSNFSNTTTIVQNLNDNQVTRS
Physico‐chemical
properties
protein length:400 AA
molecular weight: 45882,99890 Da
isoelectric point:5,70177
aromaticity:0,09000
hydropathy:-0,59850

Domains

Domains [InterPro]
DC_0415
STR
8–199
DC_0415
Coil
Unmapped
114–141
Coil DC_0415
Coil
Unmapped
191–233
Coil
XHH73896.1
1 400
Architecture
STR
STR 8-400
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Helicobacter phage Pt11470_2
[NCBI] 		3331678 Viruses >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XHH73896.1 [NCBI]
Genbank nucleotide accession
PQ159903.1 [NCBI]
CDS location
range 10814 -> 12016
strand +
CDS
ATGAATTATCCTAATCCACCAAGACCAGAGATCACCACTAAAGAAAAACCAGCGTTTAAAGAAATCACAAGCGAGTTATTAAGAGAGCTTGAAAACGCTTTAAATGATGCTACATTATGGAAAGAGCAGGTTAATTTAAGCCTTAAGGGAGTGAAAAGGATTTTAGAAGTTATAACGGGCATAGATTTTTTTCAAAAAGCCAATGAAATTGATGAGAGATTGAGAGGGATCGTTAAATGGCTAGAAAATTCAAGCGATGGACTGCAAACTAAAATGAAAGAATACGAGCACTTTTTTAGCGAGTTTAATACAAGCATGAAAAGCAACGAGCAAGAAGTAACCAACACTTTAAACGCTAACACCGAAAACATTAAAAGCGAGATTAAAAAGCTAGAAAATCAAATTGTAGAAACCGCCACGAAGCTTTTAACGAGCTATCAAATCTTTTTAAACCAGGCTAGAGAAAACGCTACCACGCAAATTAACACCAAAGAGACGCAAGCGATAACTAACATTAACGAAGCCAAAACGAACGCTAACAACGAAATAAGCAACAACCAAACGCAAGCAATAAATAACATTAACGAAGCAAAAGTTAGCGCTAACAATGAAATAAACACCAATAAGCAAGAAGTTTTAAATAACATTACGCAAGAAAAAAACCAAGCCACAACAGAGATCACGGAAGCGAAAAAAACCGCATTTAACGAACTTTTAGAAACACTAAAGCCGAAGTTTAGCGGCTTGTTTGTGGGGGCTTACTATATTCGCAATGTGATTTATATTCAAGGCGGATGGGAGCAAAAAGTTAAAGACTTGAGCGATTACACGCTAGAGAAAAGCAAGAAATACGAAATAGAAGTATTTTTCCAATTTGTGAGCGCGAAAATTGTAGAAAAAGATTTGTATTTTGGGCTGAAAGTGCAAGAAGGCTTTTTAAAAGAAAGCATCCAGAAACTCACGCATAAGTATGTATCGCAAATTTACCATGCGAAGCTTTTAATAGAGAATGTGAGCGGTGTTTTAAGCTTGTATCATGGCTATTTTTACGGGAATATCAATTATTTCAATGAGAGCCTCATAACAAGCATTAGAGAATTACCTAACGATACCATTATAAGCAAAGTATCTAATGGATCTAATTTTTCTAACACGACAACGATCGTGCAGAATTTGAACGACAATCAAGTAACAAGGAGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
eade6668e830fe2187a41847cca3715d4b3789bacb01b07fc19e5bdab7f940d7
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6650
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Screening and in silico characterization of prophages in Helicobacter pylori clinical strains Ferreira,R., Pinto,G., Presa,E., Oleastro,M., Silva,C., Vieira,L., Sousa,C., Pires,D.P., Figueiredo,C. and Melo,L.D.R. — — GenBank