Protein

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Genbank accession
YP_001686889.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MTWGTSSWGTTPWGVRGFAALPSPAAFTAATQDSECDAVFLVEMLPRTGATATVAYKPLTWGTYAWGTLPYSLPADPSIRIDWSDRDWTSRPDDTRANIHFEGRAEAPQFDRSIPIVPGSGRAAVSIGELIGVNADGAYDTYPDAYAVDATPVRVLALPKRSSLYSEAAVVFSGQGLDWWADSSLHVRMRDSGYLLDVPLCALYGGTGGIDGGTELAGKVIRQTYGLCRNITGDLINSSLLIYRGHDRLAQAVDAVYISGVPLTWDGATYSSYAALAAASVPSGQYTKWLGSDGSGWRLGSSPGGTVTADVRGDAVGGYVSDTAGVIRRLLERGVSTASLALSSFASMASYLPGTIGYHVSSQRNISAAATEVAIAAAAWWGDAGDGLFSVGRLAAPVGGGLAFGPEQIVDEVEPMALPDDIAPCIWRVDAGYRRNWTPLQGTDIAPVPSVPTEQRRQELAAQSRRSAVALIERQVRNQLAKPLVIESLFDAEADATALCNNLLTLYQQGRRYYRVPVGMSGYLPRLGDTISVTWPRWGLAGGKSLRVVGQRAQGRKVDLLCFG
Physico‐chemical
properties
protein length:564 AA
molecular weight: 60053,85970 Da
isoelectric point:5,45412
aromaticity:0,09220
hydropathy:-0,04823

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_001686889.1
1 564
Domain Start End Length (AA) Confidence
N-terminal 1 259 259 0,8546
Central domain 260 458 200 0,1650
C-terminal 459 564 105 0,3021
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-259
Central
260-458
C-terminal
459-564

Taxonomy

  Name Taxonomy ID Lineage
Phage Azospirillum phage Cd
[NCBI] 		467481 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Azospirillum brasilense
[NCBI] 		192 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodospirillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_001686889.1 [NCBI]
Genbank nucleotide accession
NC_010355.1 [NCBI]
CDS location
range 36039 -> 37733
strand +
CDS
ATGACCTGGGGAACTTCCTCTTGGGGGACGACGCCATGGGGCGTGCGGGGCTTTGCGGCCCTGCCGTCCCCTGCGGCGTTCACCGCGGCTACGCAGGACAGCGAGTGCGACGCCGTGTTTTTGGTGGAGATGCTGCCTCGCACCGGGGCTACGGCCACCGTCGCTTACAAGCCGCTGACGTGGGGCACCTACGCGTGGGGCACCCTGCCATACTCTCTGCCGGCCGATCCGTCGATCCGCATCGATTGGTCGGATCGGGATTGGACCAGCCGTCCGGACGACACGCGGGCCAACATCCACTTTGAGGGCAGGGCAGAGGCGCCGCAGTTCGACCGCAGCATCCCCATCGTACCAGGGAGCGGTCGGGCCGCGGTGTCCATCGGCGAGCTTATCGGCGTCAACGCCGATGGGGCATACGACACCTACCCAGACGCCTACGCTGTTGACGCCACGCCTGTCCGGGTCCTTGCCCTGCCGAAGCGCTCCAGCCTCTACAGCGAAGCCGCCGTGGTCTTCAGCGGTCAGGGCTTGGACTGGTGGGCGGATAGCTCGCTCCACGTCAGGATGCGGGATAGCGGCTACCTCTTGGACGTTCCCTTGTGTGCGCTCTACGGAGGGACCGGCGGCATTGACGGCGGGACGGAGTTGGCCGGCAAGGTGATCCGGCAAACATACGGCCTATGCCGCAACATCACGGGCGACCTGATAAACTCGTCGCTCCTGATATACCGCGGCCATGACCGTCTCGCGCAGGCTGTGGATGCCGTCTACATCAGCGGCGTGCCGTTGACATGGGACGGAGCCACCTACAGCAGCTATGCGGCCTTGGCTGCGGCATCTGTCCCGTCTGGGCAATACACCAAGTGGCTCGGCTCTGACGGCTCCGGGTGGCGGCTTGGATCGTCTCCAGGCGGAACGGTCACGGCAGACGTCCGCGGCGATGCCGTTGGCGGCTACGTCTCCGATACCGCTGGCGTGATCCGGCGGCTGTTGGAGCGTGGCGTGTCAACGGCATCCTTGGCGCTGTCCAGCTTTGCGTCAATGGCTTCCTACCTGCCGGGCACCATCGGCTATCACGTCTCCAGCCAGCGGAATATCTCCGCGGCTGCGACGGAGGTTGCGATAGCCGCCGCGGCTTGGTGGGGGGATGCCGGAGACGGTCTCTTTTCGGTGGGCCGTCTCGCCGCACCGGTCGGTGGAGGGCTGGCCTTTGGGCCGGAGCAGATTGTTGATGAGGTGGAGCCTATGGCTTTGCCTGATGACATCGCCCCCTGCATCTGGCGTGTTGACGCCGGATATCGCCGCAACTGGACGCCGCTCCAAGGGACCGATATCGCGCCTGTCCCCTCCGTCCCCACGGAGCAGCGACGGCAGGAACTTGCAGCGCAATCCAGGCGGTCGGCGGTGGCGCTGATCGAGCGTCAGGTGAGAAACCAACTCGCCAAGCCGCTCGTGATCGAAAGCCTGTTTGACGCCGAGGCCGACGCAACGGCGCTCTGCAACAACCTTTTGACGCTCTACCAGCAAGGCCGCCGCTACTACCGGGTGCCGGTGGGAATGTCGGGCTACCTGCCTCGTCTCGGCGACACCATCAGCGTCACATGGCCCCGCTGGGGTCTGGCCGGCGGCAAGTCGCTGCGGGTGGTCGGGCAGCGGGCGCAGGGCCGCAAGGTGGATCTGCTCTGCTTCGGATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
21bd51f3a9c25edb0e0f4671d276d49ef5a4463ee0ec9ff965f96b17d22ee663
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8857
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50