Protein

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Genbank accession
YP_009844547.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,58
Protein sequence
MSSTNQIPYAFAGTKTKMPYLGSGYIAGEAPPPLVPDHPDGRTYVDYQIKPLVVKVLHADSFTPISEVKSLPDGTWRIEGLDPAQRYQVIFQNDTYRDSSNTLYNSFIQDWITAVPMPYVAPADELLMAVPLVTERWAMPSTIQAWSVNGGVLTTPTFSGSFTGVTVETNKTSVNVRLVPVQQIGTYTLQVSAIKDTNTITTGLRSFRIRPQQVDTQQFIRFALLGTTPGPASAISTWNRALNNNGTLTNGTFTADADALSPDYPVSLNSNWSADIISGGMFNDGAGNWISLNNGYNNGVTVEGWFNVSTWPTTDSAMLTSIQTSNAASSLIGLTLLPSKRIGTIMKYGSTNSARFENVGEADYTLPTGEWFHVLVHIPPSQADGYLYINGQYVDKWSMIKRNTVPTNTNLTIGYVTFMCNNGQGCTGTAVAKCNRVVWLESRFSNQNFTPSKNKYHEYQATVQCATYGVNGNAVNEMSSCEGTWNTTGNVSSRPVFDPVEGVVFPNTTATDGYAWINISRGYGGVKGSFCLDVWFKPLTAYNGDKNIIQLGNAGSSDGRMHIALNNGKLKSFCAPYTAATGVTMNGTTVLNNNQWYLATLCCDVIQREWRLYLDGTLEASIADPTLAPLALPAVSSLIQIILGGRHPLNNSGSGTIPSFHGVIGATRLTVNGPRYYSGFTPTGIGAWDALPARPAA
Physico‐chemical
properties
protein length:697 AA
molecular weight: 75461,94730 Da
isoelectric point:6,26351
aromaticity:0,10187
hydropathy:-0,16026

Domains

Domains [InterPro]
DC_0739
ATT
1–245
DC_0739 IPR013320 G3DSA:2.60.120.200
G3DSA:2.60.120.200
STR
233–437
G3DSA:2.60.120.200 IPR013320
PF13385
LEC
285–415
PF13385 IPR013320
PF13385
LEC
515–627
PF13385
YP_009844547.1
1 697
Architecture
ATT
STR
STR
ATT 1-245 | STR 246-437 | STR 466-670 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009844547.1
1 697
Domain Start End Length (AA) Confidence
N-terminal 1 14 14 0,9267
Central domain 15 282 269 0,3148
C-terminal 283 697 414 0,7605
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-14
Central
15-282
C-terminal
283-697

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage YB07
[NCBI] 		2555548 Uroviricota > Caudoviricetes > Menderavirus >
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009844547.1 [NCBI]
Genbank nucleotide accession
NC_048755 [NCBI]
CDS location
range 135412 -> 137505
strand +
CDS
GTGAGTAGCACAAATCAAATCCCATACGCTTTCGCCGGTACAAAGACGAAGATGCCCTATCTTGGTTCCGGCTATATCGCTGGCGAAGCGCCGCCTCCACTTGTTCCAGATCATCCGGACGGTAGAACCTATGTCGACTACCAGATCAAGCCTCTGGTTGTCAAGGTATTGCATGCAGACTCGTTCACCCCAATCTCTGAGGTGAAGTCTCTGCCGGATGGCACATGGCGCATTGAGGGCTTGGACCCAGCCCAGCGATATCAGGTGATCTTCCAGAACGACACCTACAGAGATAGCAGCAACACGCTATACAACTCCTTCATCCAGGATTGGATCACGGCTGTCCCTATGCCCTATGTAGCTCCAGCCGATGAGCTGCTGATGGCTGTGCCTCTCGTCACGGAAAGATGGGCTATGCCGTCTACGATTCAGGCTTGGTCTGTCAATGGTGGCGTCTTGACGACTCCCACCTTCTCCGGGTCATTCACTGGAGTTACAGTCGAAACCAACAAGACTAGCGTGAATGTGCGGCTAGTGCCTGTGCAACAGATCGGCACGTACACCTTGCAGGTGTCGGCTATTAAAGACACAAACACTATCACGACCGGCTTGAGATCCTTCAGAATCCGACCGCAGCAGGTAGACACACAGCAGTTCATCCGCTTTGCTTTGCTTGGTACAACGCCAGGCCCGGCTAGCGCTATTTCCACTTGGAATCGTGCGTTGAACAACAATGGCACCTTGACAAACGGAACGTTCACTGCAGATGCGGACGCGCTATCGCCAGACTATCCTGTGTCTCTGAACAGCAACTGGTCAGCTGATATCATCTCTGGTGGTATGTTCAATGATGGTGCAGGTAACTGGATCTCTCTGAACAACGGCTACAACAATGGAGTCACGGTCGAGGGTTGGTTCAATGTGTCGACTTGGCCCACTACCGATTCAGCTATGCTGACGTCGATCCAGACATCCAATGCTGCATCATCGCTTATCGGCTTGACCCTTTTGCCATCCAAGAGGATTGGCACAATCATGAAGTATGGCTCGACCAACTCGGCTAGGTTCGAGAATGTAGGTGAAGCCGACTACACGTTGCCGACTGGCGAGTGGTTCCATGTGTTGGTCCACATTCCTCCCAGTCAAGCTGACGGCTATCTGTACATCAACGGGCAGTATGTGGATAAGTGGTCGATGATCAAGAGGAACACAGTTCCTACCAACACAAACCTGACCATCGGCTATGTCACCTTCATGTGCAACAATGGTCAGGGCTGCACAGGAACAGCTGTGGCCAAGTGTAACAGGGTTGTGTGGCTTGAGAGTCGCTTCTCTAACCAGAACTTCACTCCATCAAAGAACAAGTATCATGAGTATCAAGCTACCGTCCAGTGTGCCACATATGGGGTCAACGGTAACGCTGTGAATGAGATGAGCTCTTGCGAAGGCACATGGAACACAACAGGCAATGTGTCCTCAAGGCCTGTGTTCGATCCAGTTGAGGGTGTGGTCTTTCCCAACACGACAGCGACAGATGGATATGCTTGGATCAACATCTCGCGTGGGTATGGCGGTGTCAAGGGTTCGTTCTGTCTGGATGTGTGGTTCAAGCCACTGACGGCATACAATGGTGACAAGAACATCATTCAGTTGGGTAATGCCGGTTCATCGGATGGTCGCATGCACATCGCCCTGAACAATGGTAAGCTGAAGTCGTTCTGTGCGCCATACACAGCTGCGACGGGTGTCACCATGAACGGGACGACGGTGCTTAACAACAACCAATGGTATCTGGCCACCTTGTGTTGCGATGTGATTCAGCGCGAGTGGAGACTCTACCTGGATGGAACGCTTGAGGCTAGCATCGCTGACCCCACGCTTGCACCGTTGGCATTGCCGGCTGTCTCTTCACTGATCCAGATCATCTTGGGCGGTCGTCATCCATTGAATAACTCAGGTAGCGGCACGATCCCATCATTCCATGGCGTCATCGGTGCAACACGATTGACTGTCAATGGCCCTCGCTACTACTCCGGCTTTACGCCTACTGGCATCGGCGCATGGGATGCACTGCCAGCTCGCCCAGCGGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
76f025f0cdb3b92f320958d8344843d72aecbc651531f4ed1d7a9f49848c1ecc
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6032
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50