Protein

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Genbank accession
AGN33873.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence RBPdetect
Probability 0,84
Protein sequence
MSKLIVAELGGIPQTLDKITVPAGHIFKTNGDVIHAGNDYFQLPTGTTADRPGSPVVGYLRFNTTTNVPEYYDGSAWSEANSEVGTQASPATGPLAILAGNPQAADGIYYFDHGQGSYQAYADMKSGGYLLVGKISNSPVDTSNPWSYSGTRWNQQTPTNETECQNVNSGDALNRGYYQYTSLDGFAMGMTSPTNLIRVARAGVTSRSAFNTRFDTSIGRWQWLDWMEADYKYWDNQPYCNAEGFYRIDISSVGMRFGITMNNENDCNSNDSAVGFGVYTNSQNASGDRNVPAGGYRWSPTTRYPKNGWIFVR
Physico‐chemical
properties
protein length:313 AA
molecular weight: 34366,28980 Da
isoelectric point:5,08160
aromaticity:0,12780
hydropathy:-0,55655

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Synechococcus phage S-CAM8
[NCBI] 		754038 Uroviricota > Caudoviricetes > Pantevenvirales > Neritesvirus > Neritesvirus scam8
Host Synechococcus sp.
[NCBI] 		1131 cellular organisms > Bacteria > Bacillati > Cyanobacteriota/Melainabacteria group > Cyanobacteriota > Cyanophyceae
Host Synechococcus sp. WH 7803
[NCBI] 		32051 Bacteria > Cyanobacteria > Oscillatoriophycideae > Chroococcales > Synechococcus >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGN33873.1 [NCBI]
Genbank nucleotide accession
HQ634178 [NCBI]
CDS location
range 28300 -> 29241
strand +
CDS
ATGAGTAAGTTAATTGTTGCAGAACTTGGGGGTATTCCTCAAACTCTCGATAAAATTACAGTTCCAGCAGGTCACATCTTCAAAACTAATGGTGATGTAATTCATGCAGGAAACGATTATTTTCAGTTACCAACTGGTACAACAGCAGATCGCCCTGGTTCTCCTGTTGTAGGTTATTTGCGTTTTAATACAACAACTAACGTACCTGAGTATTATGATGGTTCTGCATGGAGTGAAGCAAATAGTGAGGTAGGAACACAAGCATCTCCTGCAACTGGTCCTCTTGCTATTCTTGCTGGAAATCCTCAAGCAGCAGATGGTATTTACTATTTTGATCATGGTCAAGGTTCATATCAAGCGTATGCTGATATGAAAAGTGGAGGTTACTTGTTAGTTGGTAAAATTTCAAATAGTCCAGTAGATACTTCAAATCCATGGTCATATAGTGGGACACGTTGGAATCAGCAAACACCTACTAATGAAACTGAATGTCAGAATGTAAATTCTGGAGATGCATTAAATAGAGGATACTATCAGTATACTTCTCTTGATGGATTTGCTATGGGAATGACTAGTCCTACAAACTTAATCAGAGTTGCTCGTGCGGGAGTTACATCAAGATCTGCATTTAACACTAGATTTGATACATCAATTGGTCGTTGGCAATGGTTAGATTGGATGGAAGCAGACTATAAGTATTGGGATAATCAACCCTATTGTAATGCTGAGGGTTTCTATAGAATAGATATTAGTAGTGTAGGTATGAGATTTGGTATTACTATGAACAATGAAAATGACTGCAACAGTAATGATTCTGCAGTTGGTTTTGGAGTATATACCAATAGTCAAAATGCTAGTGGTGATAGAAATGTCCCTGCTGGCGGTTACCGTTGGTCTCCCACAACTCGTTATCCGAAAAATGGTTGGATTTTTGTAAGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c7e08ce08272cdf9d79b7000d24cc0e0cfaf87e638f2e0c57b522778680f80b5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5230
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Synechococcus phage S-CAM8 0608BI06 Henn,M.R., Martiny,J., Weihe,C., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank