Protein

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Genbank accession
XRA21203.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MAYSNLSFVRHVGDGVKTLFPLTVAGENMGYFRVEDIHTYVDDKEVPNVIQSQSPHIVSITPAPPAGSDVLIRREMPIEKPYADFSRGNNFGHRQVNNSFLQQLYLTQELIDGFTPKGFYMKQDVDFGGHVLKNLGDAVGQDDAVKKSVTDSLDNRIETLETGVVKGDFSLVNWPYDAVGGESVIQIPYTIQAIFSVHINGVFQRPKRAWDFSGSVLTFAESLEDGDEVDVLIGSLP
Physico‐chemical
properties
protein length:237 AA
molecular weight: 26227,11420 Da
isoelectric point:4,75398
aromaticity:0,10127
hydropathy:-0,19831

Domains

Domains [InterPro]
IPR005604
ATT
1–114
IPR005604
DC_0041
STR
1–237
DC_0041
XRA21203.1
1 237
Architecture
ATT
STR
ATT 1-114 | STR 115-237
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage phiVP140
[NCBI] 		3414682 No lineage information
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XRA21203.1 [NCBI]
Genbank nucleotide accession
PV454341.1 [NCBI]
CDS location
range 7735 -> 8448
strand -
CDS
ATGGCGTACAGTAACCTCTCGTTCGTTCGCCACGTAGGGGATGGGGTTAAGACTCTGTTCCCTTTAACAGTGGCTGGCGAGAATATGGGGTACTTTCGTGTAGAAGATATTCATACTTATGTAGATGATAAGGAAGTACCCAATGTAATACAATCACAATCACCTCACATCGTTAGCATTACACCAGCACCTCCTGCTGGCTCTGATGTTCTTATTCGTCGTGAGATGCCTATAGAAAAGCCATATGCAGATTTCTCTCGTGGCAATAACTTCGGACATAGGCAAGTTAACAACTCATTCTTGCAGCAGCTCTATCTGACCCAAGAGCTTATCGACGGGTTCACACCAAAAGGTTTCTACATGAAGCAAGATGTAGATTTCGGTGGGCATGTTCTTAAGAATCTCGGAGATGCAGTAGGCCAAGACGATGCAGTTAAGAAATCTGTTACAGACAGTCTTGATAATCGTATTGAGACACTAGAGACAGGTGTGGTTAAAGGAGATTTCTCTCTTGTAAACTGGCCTTATGATGCAGTTGGTGGGGAGTCTGTTATACAGATTCCATACACTATTCAAGCTATATTCTCTGTTCATATAAATGGTGTATTCCAAAGACCTAAACGTGCTTGGGATTTTTCTGGCAGTGTTCTTACCTTTGCAGAGAGCTTAGAGGATGGTGATGAAGTTGACGTGCTTATTGGTTCATTACCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
10bb05565696306e1c49ab84be9aeb35bade2d330ed9e086f51c8fad50a827a1
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8522
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50