Protein

View in Explore
UniProt accession
A0A8S5SQS5 [UniProt]
Protein name
Collagen-like protein
RBP type
TF
Evidence RBPdetect
Probability 0,90
TF
Evidence RBPdetect2
Probability 0,93
Protein sequence
MRPQTFQHPEIRDENDNIIKPGSFGKNTPFCTKGNDGILDYIANDLEYLYENGGSGGSGAGPKGDPGPKGDPGPKGDPGPKGADGKNGQDGAAATIKVGEVTTGTSASVTNSGNSTNAVFDFVIPVSGGGQGIQGPKGDPGPKGDPGPKGDPGPKGDPGPKGTDGKDGVAATIKIGTVTTVAPGTNAKVTNTGTANAAVFNFSIPKGEKGEKGNTGIQGPPGPAADLSQYVKKTEIFDGNMIKLPNGAKIGVE
Physico‐chemical
properties
protein length:253 AA
molecular weight: 25180,44940 Da
isoelectric point:5,57167
aromaticity:0,04743
hydropathy:-0,69723

Domains

Domains [InterPro]
IPR050149
Unmapped
53–223
IPR050149
G3DSA:1.20.5.320
STR
60–117
G3DSA:1.20.5.320 DC_1037
DC_1769
STR
84–169
DC_1769
A0A8S5SQS5
1 253
Architecture
STR
STR 60-247 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Siphoviridae sp. ctkyE7
[NCBI] 		2827926 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAF53405.1 [NCBI]
Genbank nucleotide accession
BK032652 [NCBI]
CDS location
range 38082 -> 38843
strand +
CDS
ATGAGACCGCAAACTTTTCAGCACCCAGAAATAAGAGATGAGAATGACAATATTATTAAGCCCGGATCATTCGGGAAAAACACGCCGTTTTGCACGAAGGGGAATGACGGCATTTTAGACTACATTGCGAACGACCTTGAATATCTATATGAAAACGGGGGCAGCGGCGGTAGCGGAGCAGGTCCGAAAGGTGACCCAGGTCCTAAGGGCGACCCCGGACCAAAGGGTGACCCGGGTCCTAAGGGTGCCGACGGGAAGAACGGACAAGACGGGGCAGCGGCAACGATAAAAGTCGGAGAAGTGACGACAGGTACCTCCGCTTCGGTGACAAATTCCGGCAATAGTACAAATGCTGTATTTGATTTTGTCATTCCGGTTTCCGGCGGCGGACAGGGTATTCAAGGCCCCAAAGGAGATCCCGGGCCCAAAGGAGATCCCGGGCCCAAAGGAGATCCCGGGCCTAAAGGAGACCCCGGACCGAAAGGAACAGACGGAAAAGACGGAGTCGCTGCAACAATCAAAATCGGAACGGTAACAACAGTGGCACCAGGCACGAACGCTAAGGTCACAAATACCGGGACAGCCAACGCGGCAGTGTTTAATTTTTCGATTCCAAAAGGCGAAAAAGGAGAAAAAGGAAATACAGGAATACAAGGTCCGCCGGGTCCCGCAGCGGATCTATCGCAATACGTAAAAAAGACAGAAATTTTTGATGGGAACATGATTAAATTGCCTAATGGTGCAAAGATAGGAGTGGAATAA

Genome Context

Genome Context

Gene Ontology

Description Category Evidence (source)
GO:0031012 extracellular matrix Cellular Component IEA:TreeGrafter (UniProt)
GO:0005615 extracellular space Cellular Component IEA:TreeGrafter (UniProt)
GO:0030020 extracellular matrix structural constituent conferring tensile strength Molecular Function IEA:TreeGrafter (UniProt)
GO:0030198 extracellular matrix organization Biological Process IEA:TreeGrafter (UniProt)

Tertiary structure

PDB ID
108cbda48d30624ad0f908e3a0653b3efc094f19eeccaa268ee36fb8e0f9e02a
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6296
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50