Protein

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Genbank accession
XXJ49562.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MADTIDLDGEKFVSPSFVTSATSLDDIYTAWVADFQGPTTAYNPSWPSTDDSATLLPIPPLWTGGADRLVVSTECGVEIVPYQFTSASTHYSQAIAGVSRYYSINCGLRLAIIFHPTGVDSGITSFSGNYNADLALFRGTHNRSSENVQFVARVVPGRQIDVAIKNTAQTAGLPIKLVVLNGTTVVSSTDLTTIVQGGVTLVTCSIYGGTVSGTVVDQAGQPATRIVHVHERETGSVIGRGRSDSSGLFEIPVIAKVGTTMYVVGLDDENSPLINAVIADRIVLE
Physico‐chemical
properties
protein length:285 AA
molecular weight: 30130,48230 Da
isoelectric point:4,76876
aromaticity:0,07368
hydropathy:0,15789

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XXJ49562.1
1 285
Domain Start End Length (AA) Confidence
N-terminal 1 22 22 0,8395
Central domain 23 221 200 0,3955
C-terminal 222 285 63 0,4218
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-22
Central
23-221
C-terminal
222-285

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage Atpa001
[NCBI] 		3423286 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa
[NCBI] 		287 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Pseudomonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XXJ49562.1 [NCBI]
Genbank nucleotide accession
PV641718.1 [NCBI]
CDS location
range 20987 -> 21844
strand -
CDS
ATGGCCGACACCATCGACCTGGACGGCGAAAAATTCGTCTCTCCATCATTCGTCACCAGTGCGACATCGCTCGACGACATCTATACCGCCTGGGTGGCCGACTTCCAAGGCCCAACGACGGCCTATAACCCTAGCTGGCCGAGCACCGATGATAGTGCGACGCTGCTACCAATCCCGCCGTTGTGGACCGGCGGCGCCGATAGGTTGGTTGTTTCTACCGAGTGCGGTGTGGAGATTGTCCCCTACCAGTTCACCTCGGCCAGTACGCACTACTCACAGGCGATCGCAGGAGTTAGCCGGTACTACTCGATCAACTGCGGGCTGCGCCTGGCGATTATCTTCCACCCGACTGGTGTCGACTCAGGTATTACCAGCTTTTCGGGCAACTACAACGCCGACCTGGCGCTATTTCGCGGCACGCATAACCGATCCAGTGAAAACGTCCAATTCGTGGCGCGTGTCGTTCCGGGCAGGCAAATCGATGTGGCCATCAAGAACACCGCCCAAACTGCTGGACTCCCCATCAAGCTGGTGGTCCTCAACGGCACCACTGTGGTGTCTTCCACCGACCTGACTACGATCGTTCAGGGTGGTGTCACACTGGTGACATGTTCCATCTACGGTGGGACCGTCTCGGGCACCGTCGTGGACCAGGCTGGCCAGCCTGCTACCCGCATCGTCCATGTTCACGAGCGCGAAACAGGGTCGGTGATTGGTAGAGGACGCAGCGACTCATCAGGTCTGTTCGAAATTCCAGTCATCGCGAAGGTGGGTACCACCATGTACGTAGTCGGCCTGGACGATGAGAACTCGCCGCTGATCAATGCTGTGATCGCCGATCGCATCGTGCTGGAGTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
5210de8eb33b8bc3978c930dc74c63aa9556ff2d3f30e9a80319130fdef89be6
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4851
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50