Protein

View in Explore
Genbank accession
UNY42488.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,53
Protein sequence
MADVQTRPDNDIFASSAGTGELLPFGDLARGWGATLGYSEGIPPMEWFNFIGNRTDKGIHYILQQGVDIWVETETYPVGALVKVNADNMLYRCLVQNINMPPSANPTQWRPVLDLTAASAAARQVGKASGNVIQVGAFGLGGNAEVVTNANSIVNDGIYQLPASGTGGPTNGVETEILHINWDANNASQWARTKGKRVIAMREKVNNTWGGWSYSYGPDNKPTAAELGINQDFIPMDGSDSIRGNLGTIGWLHIARTTSDLLRAANSAGVGTVEYSGNIAGGTAVQELLTSVSVAANSNVVTAARWGSVPMSHIQHILVAGGATQINMAVCRPGGIADRRTVALQVDGLNSRVTTTNSFILCENGVRVYSPNNPQPIDTSAGNVRGIRLGARIAAGVSESTFYPGHVMTGWRFGNKKELRGGTYWSAPLQYYINGTWINVSNVS
Physico‐chemical
properties
protein length:444 AA
molecular weight: 47266,43880 Da
isoelectric point:6,60403
aromaticity:0,07883
hydropathy:-0,16014

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UNY42488.1
1 444
Domain Start End Length (AA) Confidence
N-terminal 1 193 193 0,7462
Central domain 194 392 200 0,0644
C-terminal 393 444 51 0,9995
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-193
Central
194-392
C-terminal
393-444

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage vB_EcoM_PiR
[NCBI] 		2924893 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia sp.
[NCBI] 		1884818 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UNY42488.1 [NCBI]
Genbank nucleotide accession
OM313461.1 [NCBI]
CDS location
range 22199 -> 23533
strand +
CDS
ATGGCTGATGTACAAACAAGACCCGATAACGACATCTTCGCCAGCTCCGCGGGTACTGGTGAACTGCTGCCGTTCGGTGACCTTGCTCGTGGCTGGGGTGCAACCCTTGGCTACTCAGAAGGTATTCCTCCGATGGAGTGGTTTAACTTTATCGGTAACCGTACTGACAAAGGTATCCACTACATCCTTCAGCAGGGTGTTGATATATGGGTAGAAACTGAGACCTACCCGGTTGGTGCACTGGTTAAAGTTAACGCCGACAATATGCTGTACCGTTGTCTGGTGCAGAACATTAATATGCCACCGTCTGCTAACCCTACACAGTGGCGTCCTGTACTTGACCTGACAGCTGCATCTGCTGCAGCACGACAGGTTGGTAAAGCCTCTGGTAACGTAATCCAGGTCGGTGCATTTGGCTTAGGCGGCAACGCTGAGGTAGTTACTAATGCTAACAGCATTGTAAACGACGGTATCTACCAGCTTCCAGCGTCAGGTACGGGCGGACCTACTAACGGCGTTGAGACTGAGATTCTGCACATCAACTGGGATGCTAATAACGCTTCACAGTGGGCACGAACCAAAGGTAAGCGCGTAATTGCTATGCGTGAGAAGGTTAACAATACCTGGGGTGGCTGGTCATACTCTTACGGGCCTGACAATAAACCTACGGCTGCTGAGCTGGGTATTAACCAGGACTTCATCCCTATGGATGGTTCTGACTCAATCCGTGGTAACTTAGGTACTATTGGCTGGTTGCATATTGCACGTACTACTTCCGACTTGCTACGTGCTGCTAACTCCGCTGGTGTAGGTACTGTCGAGTATTCTGGTAACATCGCAGGTGGTACTGCTGTTCAGGAGTTGCTGACTTCAGTTTCTGTCGCGGCTAACAGTAATGTTGTCACTGCTGCTCGCTGGGGATCTGTACCTATGTCGCACATCCAGCACATCCTTGTGGCTGGCGGTGCTACACAGATTAACATGGCGGTATGTCGCCCTGGTGGTATTGCCGACCGCCGTACAGTAGCTTTGCAGGTGGATGGTCTTAACAGCCGAGTAACTACCACAAATAGCTTTATTTTATGTGAGAATGGTGTTAGAGTATATTCACCTAACAACCCGCAGCCTATCGATACTTCAGCCGGTAACGTTCGGGGTATTCGACTCGGCGCTCGTATTGCTGCTGGTGTATCCGAGTCAACATTCTACCCGGGCCATGTAATGACTGGCTGGCGCTTCGGTAATAAGAAAGAGCTGCGCGGTGGTACATACTGGTCAGCGCCGTTACAGTATTATATCAACGGCACTTGGATTAACGTAAGCAACGTATCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a17909772f51703bf2f68941fd03a5935c03595dc3d98e3210fc1f3fa06b1640
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6709
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome analysis of Escherichia phage vB_EcoM_PiR Alexyuk,M., Bogoyavlenskiy,A., Alexyuk,P., Moldakhanov,Y. and Berezin,V. 2022-11-17 — GenBank