Protein

View in Explore
UniProt accession
A0A8S5PM52 [UniProt]
Protein name
Tail collar fiber protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MLIWNPSKLTTKGKALLAKAQAGRCTIKITKAQTGSGQYSSGEATDTRTSLKTPVQTLPIHSKEIQNGSTLVLKVAITNKTSDTDVLKSGYEIREFGIFAQDPDDGEILYSIATASTSDYMPAYNGVIPSVISMSYYLEVANASSVTIVTAGGLALQSDLEALADRVTIIEQAAVKKYGARKKVGQQSCGAESWERLGGAVGLTAKAAVGTGDVQNDFMKSVYPYNACRPCNIKEDGTVTAYLGDANFSWDGSNGDVMLEMPLCYTSRYFETDSDGVEWEYRWVSSAPVDGLHVNPAFTDGSNISEKIYIPIFNGSAGKSDAGEKDVIRSIAGATPLTEVTRATFRTRSRNKGANWQLDDVWNMFLLDHLFIIMFAGTQAQRILGSGRTEFRENENDKALKTKKSTNCITIAADKAAYFFAGQQIAIGTGMWAHNVVWGRTITEFKTSTEVESATEIYFDGDPVDITEGNVIWSCVQKTGETTAMKCPNGCLENPEGPTGIKLSGRRAIRFLWIEDWFGNMWQFRDGVNIKNRQHYCCNKRASYADDTYTGDYQKLGYVCPTSDGYIKKMGFDSLHPEYELPVEVGGGADSYNGDYYYQSEGGTLVLSGGGVHYGTVAGPFSRDCSDGTGATHWNIGGRPHCRKAAI
Physico‐chemical
properties
protein length:647 AA
molecular weight: 70511,21560 Da
isoelectric point:5,57127
aromaticity:0,09892
hydropathy:-0,34389

Domains

Domains [InterPro]
DC_1066
STR
1–647
DC_1066
IPR022225
ATT
9–147
IPR022225
A0A8S5PM52
1 647
Architecture
ATT
STR
ATT 1-147 | STR 148-647
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
A0A8S5PM52
1 647
Domain Start End Length (AA) Confidence
N-terminal 1 393 393 0,4436
Central domain 394 592 200 0,3333
C-terminal 593 647 54 0,9962
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-393
Central
394-592
C-terminal
593-647

Taxonomy

  Name Taxonomy ID Lineage
Phage Caudovirales sp. ctIsq18
[NCBI] 		2825762 Uroviricota > Caudoviricetes >
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
DAE07832.1 [NCBI]
Genbank nucleotide accession
BK015458 [NCBI]
CDS location
range 26679 -> 28622
strand +
CDS
ATGCTTATTTGGAATCCAAGTAAACTGACCACGAAAGGAAAAGCGCTCCTGGCAAAAGCCCAGGCGGGCAGATGCACGATCAAGATCACAAAGGCGCAGACCGGATCCGGTCAGTACAGCTCCGGAGAGGCAACAGACACCAGAACGTCACTCAAGACACCGGTGCAGACGCTGCCGATCCACAGCAAAGAGATCCAGAACGGAAGTACACTCGTTCTGAAGGTGGCGATCACAAATAAGACCAGCGACACGGACGTCCTGAAATCAGGATATGAAATCCGTGAGTTTGGTATCTTTGCACAGGATCCGGATGATGGCGAGATCTTATACAGCATCGCAACCGCAAGCACCAGCGACTACATGCCAGCATACAACGGCGTGATCCCGTCCGTAATTTCCATGAGTTACTACCTGGAGGTAGCCAACGCATCAAGCGTCACAATCGTGACAGCAGGAGGCCTGGCACTTCAGAGCGACCTGGAAGCCCTGGCAGACAGAGTAACCATCATCGAGCAGGCAGCCGTGAAGAAATATGGAGCCAGAAAGAAAGTCGGCCAGCAGAGCTGCGGCGCAGAGAGCTGGGAACGACTCGGTGGAGCTGTCGGCCTCACAGCAAAGGCAGCAGTCGGAACCGGAGACGTCCAGAACGACTTCATGAAGTCGGTATATCCATACAACGCCTGCAGACCATGCAACATCAAAGAAGACGGTACCGTGACCGCTTACCTCGGAGATGCAAACTTCTCCTGGGATGGATCCAACGGAGACGTCATGCTGGAGATGCCGCTCTGCTACACATCCCGTTACTTTGAGACAGACAGCGATGGCGTAGAGTGGGAATACAGATGGGTATCATCCGCACCGGTGGATGGCCTGCATGTAAACCCGGCATTCACAGATGGAAGCAACATCAGCGAGAAGATCTACATCCCGATCTTCAACGGATCTGCCGGAAAGAGCGACGCCGGAGAAAAGGACGTCATCCGCTCGATTGCCGGAGCGACACCGCTCACAGAGGTAACCAGGGCAACCTTCAGAACCCGCAGCCGCAACAAAGGAGCGAACTGGCAGCTTGACGACGTATGGAACATGTTCCTGCTCGATCATCTGTTTATTATCATGTTCGCAGGCACCCAGGCACAGAGAATCCTCGGATCCGGACGTACTGAATTCAGAGAGAATGAAAACGACAAAGCTCTGAAGACTAAGAAATCAACGAACTGCATCACGATCGCAGCAGACAAAGCCGCTTACTTCTTCGCAGGTCAGCAGATCGCTATCGGAACCGGAATGTGGGCTCATAACGTCGTATGGGGAAGAACGATCACAGAGTTCAAGACTTCCACAGAAGTGGAATCTGCAACGGAGATTTACTTTGACGGAGATCCGGTCGACATCACAGAGGGAAATGTAATCTGGTCATGCGTTCAGAAGACCGGCGAGACAACCGCAATGAAATGCCCGAACGGATGCCTGGAAAATCCCGAAGGGCCTACCGGAATCAAGCTCTCCGGAAGACGCGCGATCCGTTTCTTATGGATCGAGGACTGGTTCGGTAATATGTGGCAGTTCCGCGACGGAGTCAACATCAAGAACCGCCAGCACTACTGCTGCAATAAGCGTGCAAGCTACGCAGACGACACATACACCGGAGACTACCAGAAACTCGGCTACGTATGCCCGACAAGCGACGGATACATCAAAAAGATGGGATTCGATAGCCTGCATCCGGAATACGAGCTGCCGGTCGAGGTAGGTGGTGGAGCCGACTCTTACAACGGCGATTACTACTACCAGAGCGAAGGCGGAACGCTGGTGCTCTCTGGCGGTGGCGTGCACTACGGTACGGTTGCCGGGCCTTTCTCCCGGGACTGTAGCGACGGTACGGGTGCTACGCACTGGAACATCGGCGGTCGCCCTCATTGCCGCAAGGCTGCCATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
62f4fad6145e01c2b4c18ed214484f75d94dfdd3302fa209dabc99e22a6b1fce
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9207
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50