Protein

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Genbank accession
WID30712.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,65
Protein sequence
MSNLEKSVAINLENTAHYENISNLDITFRTGESDSSVLLFNIIKNNQPLFLSEENIKARIAIRGKGVMVVAPLEILDPFKGVLKFQLPNDVIKRDGSYQAQVSVAELGNSDVVVVERTITFNVEKSLFSMIPSETKLHYIVEFQELEKTIMDRAKAMDEAIKNGEDYASLIEKAKEKGLSDIQIAKSSSIDELKQLANSRISDLENKAQAYSRTFDEQKRYMDEKHEAFKQSVNSGGLVTSGSTSNWQKAKITKDDGKIMQITGFDFNNPEQRIGDSTQFIYVSQAINYPRDVSTNGTVEYLVVTSDYKRMTYRPNGTNKVFVKRKEAGSWSEWSELAINDYNTPFETVQSAQSKANMAESNAKLYADDKFNKRYSVIFDGTANGVGSTLYLNESLD
Physico‐chemical
properties
protein length:397 AA
molecular weight: 44626,51590 Da
isoelectric point:5,28184
aromaticity:0,08816
hydropathy:-0,50932

Domains

Domains [InterPro]
IPR018913
ATT
6–152
IPR018913 Coil cd19958
G3DSA:2.60.40.3350
ATT
6–130
G3DSA:2.60.40.3350
DC_1216
STR
45–370
DC_1216
WID30712.1
1 397
Architecture
ATT
STR
ATT 6-152 | STR 153-370 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WID30712.1
1 397
Domain Start End Length (AA) Confidence
N-terminal 1 368 368 0,9770
Central domain 369 386 19 0,4171
C-terminal 387 397 10 0,1416
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-368
Central
369-386
C-terminal
387-397

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage HMGUsa1
[NCBI] 		3028475 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Staphylococcus aureus
[NCBI] 		1280 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WID30712.1 [NCBI]
Genbank nucleotide accession
OQ338183 [NCBI]
CDS location
range 18699 -> 19892
strand +
CDS
ATGAGTAATTTAGAGAAATCTGTAGCTATAAATTTAGAAAACACAGCGCATTATGAAAATATTTCAAATCTAGATATAACTTTTAGAACAGGAGAGAGTGATTCTTCTGTTCTTCTTTTTAATATCATTAAAAATAATCAACCGTTATTCCTGAGTGAAGAAAATATCAAAGCACGAATAGCGATTCGAGGTAAAGGAGTTATGGTGGTTGCTCCACTAGAAATATTAGATCCATTTAAAGGCGTATTAAAATTTCAATTACCTAACGATGTAATTAAACGAGATGGAAGTTATCAAGCTCAAGTTTCGGTTGCAGAATTAGGGAATTCAGACGTGGTAGTTGTCGAGAGAACTATCACATTTAACGTTGAAAAAAGCTTGTTTAGCATGATTCCATCTGAAACAAAATTACACTATATTGTTGAATTTCAGGAATTAGAAAAAACTATTATGGATCGTGCGAAAGCAATGGACGAGGCTATAAAAAATGGTGAAGATTATGCGAGTCTGATTGAAAAAGCTAAAGAAAAAGGGCTATCAGATATTCAAATAGCAAAATCTTCAAGTATTGATGAATTAAAGCAACTTGCTAATAGCCGTATATCTGATTTGGAAAATAAAGCGCAAGCATATTCAAGAACATTCGATGAGCAAAAGCGATATATGGATGAGAAACATGAAGCCTTCAAGCAGTCAGTGAATAGTGGTGGTTTAGTCACAAGTGGTTCTACTTCAAATTGGCAAAAAGCTAAGATTACTAAAGATGATGGTAAGATAATGCAGATTACTGGATTTGATTTTAATAATCCAGAACAAAGAATAGGTGATTCAACCCAATTTATTTATGTTTCGCAAGCTATAAATTATCCAAGAGATGTTAGTACTAACGGTACTGTCGAATATTTAGTAGTAACTTCAGATTACAAGCGTATGACTTATCGACCGAACGGTACAAATAAAGTGTTTGTTAAAAGAAAAGAAGCGGGTTCATGGTCTGAGTGGTCAGAATTAGCTATTAATGATTACAATACACCTTTTGAAACTGTTCAAAGTGCCCAATCAAAAGCTAATATGGCCGAAAGTAACGCTAAATTATACGCAGATGACAAGTTTAATAAAAGGTATTCGGTTATTTTTGATGGAACAGCAAATGGTGTGGGCTCTACATTGTACTTAAATGAGAGTTTAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d474bb483c1152b6be60be45b553cf1c31dbc777694cddc6ca0b7092de3cde46
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8186
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Metagenomic analyses of single phages and phage cocktails reveal contamination with temperate phages and bacterial DNA Peng,X. 2024-09-12 — GenBank