Protein

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Genbank accession
QPI13164.1 [GenBank]
Protein name
receptor-binding protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,87
Protein sequence
MGFFAGKYSDGKTVLSLNTESGGDINRHYSPNANSIFHSDMPFVLVDGTYEAGLGNAGNGFFVCQMPSDIINIKSNDPGRVILTAIEINGTHRAFLNGTQSQVGQFTAFFEDPPIGRAGAEVGLTSAFASGNSLAHGTYIYNSGLGHEESIARQGTGGTISQASGFNLYRPGGAYAGEAIGRAWTLAGFPAGASTVPIDGGNADYWHPNWQAPIGAAHRGHNWFYVCNSNIRGYVGKKGTVPANVNLLYQSPTYPDKVYICKGSTSNLAAQAAKKVYVQDWYNITPTKVIWYVLNLRYSNGNMGVSGNPFTGSDILITPSNFTIKGVSLPNTGYKFINQNAFGNLGYRPDMEYIGNNAAYTGAFGDTTARCEIVGSSNGSLWSPVDYGGAKSQISIYKFGAGKQWYVNSSNNTIGNEHGAVWSPSTVPLRLFPNNVASTYVGDDITPAYPGAGNYYTALATIGLGLPNANATVILTTEVIMGNINTAGGAIRTYGGTAWQVQGRRQYSYTEGDGIFHQILTLPPGYLVPYHSTTAYSYTQTWASRPDELTFRRNGYIYTIKNLGNGNAELGVIIHADEAAAIFLPRLRVTVQRLT
Physico‐chemical
properties
protein length:595 AA
molecular weight: 63810,32710 Da
isoelectric point:8,12123
aromaticity:0,12101
hydropathy:-0,20807

Domains

Domains [InterPro]
IPR059609
RBD
1–595
IPR059609
QPI13164.1
1 595
Architecture
RBD
RBD 1-595
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPI13164.1
1 595
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,1078
Central domain 11 209 200 0,7225
C-terminal 210 595 385 0,8156
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-595

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage vB_SalS_ABTNLsp4
[NCBI] 		2789811 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus ABTNLsp4
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPI13164.1 [NCBI]
Genbank nucleotide accession
MW149273 [NCBI]
CDS location
range 26932 -> 28719
strand +
CDS
ATGGGTTTTTTCGCTGGAAAATATAGCGATGGTAAGACCGTACTATCTTTAAATACTGAATCTGGTGGTGACATTAATCGTCACTATAGTCCAAATGCCAATAGTATTTTTCATAGTGATATGCCATTTGTCCTAGTTGACGGTACTTATGAAGCTGGGTTAGGTAATGCCGGAAATGGGTTTTTTGTATGTCAGATGCCCTCTGACATAATAAATATTAAATCCAACGACCCAGGTAGAGTTATACTAACTGCTATTGAGATTAATGGTACTCATAGGGCTTTTCTTAATGGTACTCAGTCTCAAGTTGGTCAATTTACTGCATTTTTTGAAGATCCGCCTATTGGTAGGGCAGGTGCAGAAGTAGGTCTTACGTCAGCTTTTGCATCAGGTAACAGCTTAGCACATGGCACTTATATTTATAACTCTGGTTTAGGGCATGAAGAATCAATTGCTAGGCAAGGTACAGGAGGTACTATATCTCAAGCCTCTGGGTTTAATTTATATAGGCCTGGTGGTGCATATGCTGGCGAGGCTATTGGAAGGGCATGGACTCTAGCAGGATTTCCAGCAGGAGCGTCTACAGTACCTATAGATGGTGGTAATGCTGACTACTGGCATCCTAACTGGCAAGCTCCTATAGGGGCCGCCCATAGGGGGCATAATTGGTTTTACGTTTGCAACTCTAACATACGAGGTTACGTAGGTAAAAAGGGCACAGTACCAGCTAATGTTAACTTATTATACCAATCTCCTACGTACCCTGATAAGGTTTATATATGTAAAGGTTCAACATCTAATCTAGCGGCACAGGCCGCTAAGAAAGTATATGTGCAGGATTGGTATAACATAACTCCTACTAAAGTTATTTGGTATGTACTTAATCTAAGGTACTCTAATGGTAATATGGGCGTATCTGGTAATCCATTTACTGGGTCAGATATACTTATAACTCCATCTAATTTTACTATAAAAGGGGTTAGTTTACCAAATACTGGATATAAGTTTATTAACCAAAATGCTTTTGGTAACTTAGGTTATAGGCCAGATATGGAGTACATTGGAAATAACGCAGCGTACACTGGAGCCTTCGGGGATACTACTGCACGCTGTGAAATTGTAGGATCTAGTAATGGATCTTTATGGTCTCCTGTAGATTATGGAGGGGCTAAGTCTCAGATTAGTATTTACAAGTTCGGAGCTGGTAAGCAATGGTACGTAAACTCAAGTAATAACACTATAGGTAATGAGCATGGAGCTGTGTGGAGTCCTAGTACTGTACCTTTAAGACTATTTCCTAATAATGTTGCTAGTACCTACGTTGGTGATGATATAACCCCCGCGTATCCTGGAGCAGGCAACTATTATACGGCTCTAGCTACCATAGGACTAGGATTACCTAATGCTAACGCAACGGTAATATTAACTACGGAAGTTATTATGGGTAATATTAATACGGCTGGAGGAGCCATACGCACATACGGTGGTACTGCTTGGCAAGTACAAGGAAGAAGACAGTATAGTTACACGGAAGGTGATGGAATATTCCATCAAATATTAACCTTACCTCCTGGATATTTAGTCCCTTATCACTCCACTACTGCATACAGTTATACTCAAACTTGGGCAAGTAGACCTGATGAGTTAACATTTAGAAGAAACGGATATATTTATACTATTAAAAATCTAGGAAATGGTAATGCTGAATTGGGCGTAATTATTCACGCTGATGAGGCTGCAGCTATTTTCCTACCGAGATTAAGAGTAACAGTTCAACGCCTTACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
02b57f5f363c9e27b8b97dce4f4de40a9de967d18be37f46df4b7517f3d0332d
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2485
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50