Protein

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Genbank accession
XOF08515.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,69
Protein sequence
MAIRPKLNRVWTSNNSVARRDPGDAKYLKGWVAEIPTYQVLNYLQYKIDTTMLAQAERGIFEWGSDVSYGVGSLAWDETNKTIYVCTVTNPSKTLRPSENSAQWSPSSIQVSRANYDSIVAAINAHIADVTTNPHKVTAAQIGAYDKSELDSIVANYRAMVQAHVTDYNNPHKLTATQVGAVPVTGGAYTGEVTFTTVYLNDSKTAQIVNDGGLYLRNGSYYLGINNSTGNAETGTASSKSNIVTELNFPDVKAAQEPRYAVELPAYEMSLIKSVNILRGAGIFNTFATEPAYNEALGGALAFVSPDVGSAGINWFNNTQLSNGSRYTICVDYTKIVQDGADGNWQFGFGMETLKVLVCFDGGVILRYRNPSGVLVNTPKVISPAVATVGKWSRICVTVADTTARIFVDGVLVARHSIPGIDSNNRRPTLSTWTKSSAITRAEFAVRSLRIWDNALSNEQVSTL
Physico‐chemical
properties
protein length:464 AA
molecular weight: 50404,99350 Da
isoelectric point:7,62003
aromaticity:0,09267
hydropathy:-0,16315

Domains

Domains [InterPro]
DC_0782
STR
6–460
DC_0782
G3DSA:2.60.120.200
STR
310–464
G3DSA:2.60.120.200
IPR013320
STR
315–464
IPR013320
PF13385
LEC
378–462
PF13385
XOF08515.1
1 464
Architecture
STR
STR 6-464
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XOF08515.1
1 464
Domain Start End Length (AA) Confidence
N-terminal 1 271 271 0,7123
Central domain 272 453 183 0,4512
C-terminal 454 464 10 0,8154
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-271
Central
272-453
C-terminal
454-464

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage EcoM1
[NCBI] 		3390904 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOF08515.1 [NCBI]
Genbank nucleotide accession
PQ818760.1 [NCBI]
CDS location
range 1 -> 1395
strand -
CDS
ATGGCAATTCGTCCTAAACTGAACCGAGTCTGGACCTCAAACAACTCTGTCGCAAGACGTGACCCAGGCGATGCAAAATATCTCAAGGGCTGGGTTGCAGAGATACCAACTTACCAGGTTCTTAACTACCTGCAATACAAGATTGACACCACTATGCTTGCTCAAGCGGAACGTGGAATCTTTGAGTGGGGCAGTGATGTAAGTTATGGCGTTGGTAGTTTGGCTTGGGACGAAACAAACAAAACGATTTATGTTTGTACTGTCACCAACCCTAGCAAAACACTACGCCCAAGTGAGAACTCTGCACAGTGGAGTCCAAGCTCCATTCAAGTTTCTCGTGCAAATTACGACTCAATTGTTGCAGCAATCAATGCGCACATTGCAGATGTAACCACAAACCCGCACAAAGTAACTGCTGCACAAATTGGTGCATATGACAAATCCGAACTTGATTCGATTGTTGCCAACTATCGTGCAATGGTTCAAGCACACGTAACGGATTACAACAATCCACACAAACTTACTGCAACTCAAGTTGGTGCTGTTCCTGTAACTGGTGGGGCATACACTGGTGAAGTAACCTTCACGACTGTGTACTTAAATGATTCTAAGACTGCACAGATTGTTAATGACGGTGGATTGTATCTTCGTAATGGGAGCTACTACCTCGGCATCAATAATTCCACAGGGAATGCGGAAACTGGTACTGCTTCGAGCAAGTCTAATATTGTTACGGAACTAAACTTCCCAGATGTGAAGGCAGCACAAGAGCCGAGATATGCTGTTGAACTTCCGGCATATGAAATGTCGCTTATTAAGTCTGTAAACATTCTTCGTGGCGCTGGAATTTTCAATACGTTTGCAACAGAACCTGCCTACAATGAGGCTCTTGGTGGGGCACTGGCTTTTGTATCTCCTGATGTTGGTTCTGCGGGTATAAACTGGTTCAACAATACGCAATTGTCGAATGGTTCCAGGTACACGATATGTGTAGACTATACGAAGATTGTTCAAGATGGTGCGGATGGTAACTGGCAATTTGGCTTTGGTATGGAAACCTTGAAGGTTCTCGTATGTTTTGACGGTGGCGTCATTCTGCGATACCGAAACCCGTCAGGAGTCCTTGTAAACACTCCCAAGGTTATTAGTCCTGCTGTCGCAACTGTCGGGAAATGGTCCAGAATTTGTGTAACAGTGGCAGACACCACTGCAAGAATATTTGTTGACGGTGTTCTTGTGGCCAGGCACAGTATTCCAGGCATAGATTCCAACAACCGTCGGCCAACACTATCGACGTGGACCAAATCTTCTGCCATTACAAGGGCAGAGTTTGCTGTACGGTCCCTTCGTATTTGGGACAATGCGCTGTCAAATGAACAAGTCTCAACTCTATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
948738c45bf843fc4dc188b640daeaf454bbbf3e9c60bcba3ee8130ce7ca9e91
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7452
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50