Protein

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Genbank accession
YP_009304494.1 [GenBank]
Protein name
tail appendage
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAKTTNAAEFNTFVGGLITEASPLTFPQNASIDEVNFILNRDGSRNRRNGMDFENGATKVVCNTLVPADGTIAVTSHNWENAGGEVGRWISLVQVGTELKFFQTTGETLSEGNFYNYQFVNMSPSHKLSYAVVDGLLVVANGSRDIYVFEYNSGSVSVTTKRLLVRDLFGVQDIVNGVDLRQGNDIATRPTVQTNAHIYNLRNQTFGVPRATWHSNEPSDPIATFRSAASGKFPSNSDSVNLALSKRADVEPSTTDRFRAEDIVLNPIGTYETARGFFIIDAMARGKSRLEEIVKLKQRYPSLSFGVSSLPQDETPGGASVVCEYAGRVWYAGFSGQIIDGDDQSPRLVSYILFSQLVDSPADIVNCYQDGDPTSTEEPELVDTDGGFIRIEGAYDIINLVNVGSAVMVVAANGIWMIQGGSDYGFTATNYLVTKISEHGCSSPNSVVVVDNSFMYWGDDGIYHLTRNQYGDYVANNLTEKTIQKYYEKIPSDAILNATGFYDSYDKKVKWLYNTVLDGRTEPVTELVFDLALGAFYPSKIGSLTAGRLPIPVGSVKIPPYKLVETDEEVTVDSEQVTVTGELVTVKVSTRSPVIRETKYIIVEKLSSPMRISFGGYTDDEFVDWKSVDGVGVDAPAYLLTGYLAGGDYQREKFVPYITFHFKKTEDGFVEDAEGDWTPTNQSSCMVQSQWSWTNSPASNKWGRTWQAYRFRRHFFPDNIDNQFDDGNSVVETKSRLRGSGKVLSLYITTEPKKNLHIYGWSMLVDVNGTV
Physico‐chemical
properties
protein length:771 AA
molecular weight: 85318,18890 Da
isoelectric point:4,88920
aromaticity:0,11025
hydropathy:-0,28521

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009304494.1
1 771
Domain Start End Length (AA) Confidence
N-terminal 1 172 172 0,9179
Central domain 173 371 200 0,5769
C-terminal 372 771 399 0,3066
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-172
Central
173-371
C-terminal
372-771

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage O4
[NCBI] 		1784982 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas aeruginosa PAO1
[NCBI] 		208964 Bacteria > Proteobacteria > Gammaproteobacteria > Pseudomonadales > Pseudomonadaceae > Pseudomonas

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009304494.1 [NCBI]
Genbank nucleotide accession
NC_031274 [NCBI]
CDS location
range 11078 -> 13393
strand +
CDS
ATGGCAAAGACGACTAACGCTGCCGAGTTTAATACTTTTGTTGGGGGGCTAATCACCGAGGCTAGCCCCTTAACTTTTCCTCAAAATGCCTCCATTGATGAAGTCAATTTCATTCTTAACCGAGACGGGTCTAGAAACAGACGCAACGGTATGGACTTTGAAAATGGCGCCACTAAAGTTGTATGCAACACGTTAGTCCCAGCAGATGGCACTATTGCCGTTACCTCCCATAACTGGGAGAATGCTGGTGGTGAAGTTGGCAGATGGATTAGTCTTGTGCAAGTAGGTACGGAGTTGAAGTTTTTCCAGACTACTGGAGAGACACTATCCGAGGGCAACTTCTACAACTACCAGTTTGTTAATATGTCCCCAAGTCATAAGCTCTCTTATGCTGTAGTAGACGGTTTGCTGGTAGTAGCTAACGGCAGCAGAGACATTTATGTCTTCGAATACAACAGCGGCTCTGTTAGCGTAACAACCAAAAGACTGTTAGTTAGAGATTTGTTTGGCGTCCAAGATATTGTGAATGGCGTTGATCTTAGGCAAGGAAACGACATTGCAACTAGACCGACTGTTCAGACTAACGCCCATATCTACAACTTGAGAAATCAGACGTTTGGTGTACCAAGGGCGACATGGCATAGTAACGAACCATCTGACCCTATCGCAACTTTTAGATCAGCAGCTTCTGGTAAGTTTCCATCCAACTCTGACTCTGTGAATTTGGCACTGTCCAAGCGTGCAGATGTTGAGCCAAGCACTACTGACAGATTTAGAGCCGAAGATATTGTACTCAACCCAATCGGCACGTATGAGACAGCTAGAGGTTTCTTTATCATTGATGCAATGGCTCGTGGTAAAAGTAGACTAGAAGAAATAGTTAAGCTGAAGCAGAGATACCCATCTTTGTCTTTTGGTGTGTCTTCTTTACCTCAAGATGAAACCCCAGGTGGAGCTAGTGTAGTTTGTGAATACGCTGGTAGGGTTTGGTATGCTGGTTTCTCTGGCCAGATTATTGATGGTGATGATCAATCGCCTAGACTTGTTTCCTACATCTTGTTTAGCCAATTGGTAGACAGCCCAGCAGATATTGTGAACTGCTACCAAGATGGTGATCCTACCAGTACAGAAGAGCCAGAACTAGTAGATACTGATGGTGGATTTATCCGTATCGAAGGTGCTTACGACATTATCAATTTGGTCAATGTCGGAAGTGCTGTGATGGTAGTGGCAGCTAATGGTATATGGATGATCCAAGGTGGTAGTGACTATGGATTCACTGCAACCAACTACCTCGTGACTAAGATCAGTGAGCATGGCTGCTCTTCTCCTAATTCCGTAGTGGTTGTTGACAACAGTTTCATGTATTGGGGTGATGATGGTATTTACCATTTGACCAGAAATCAATACGGTGATTATGTAGCAAACAATCTCACTGAGAAGACCATTCAGAAGTATTATGAAAAGATTCCATCTGATGCTATTCTAAACGCCACTGGTTTTTATGACAGTTACGATAAGAAAGTTAAATGGCTTTACAATACTGTCTTGGATGGCAGGACTGAGCCAGTAACTGAGTTAGTTTTTGATCTTGCCTTGGGTGCGTTCTATCCATCTAAGATTGGAAGCTTGACTGCTGGTAGGTTGCCAATTCCTGTAGGCTCTGTAAAAATTCCACCCTACAAATTGGTAGAGACTGACGAAGAAGTAACCGTAGACTCTGAGCAGGTAACTGTCACTGGGGAGTTGGTTACCGTTAAGGTTAGCACTAGATCGCCAGTAATTAGGGAAACCAAATACATCATTGTAGAAAAATTGTCTTCACCTATGCGTATCAGCTTTGGTGGATATACAGATGATGAGTTTGTTGACTGGAAGTCAGTTGACGGCGTAGGAGTTGACGCACCTGCTTATCTGTTGACAGGGTATCTGGCTGGTGGTGATTACCAAAGAGAAAAGTTTGTCCCATACATCACTTTCCACTTCAAGAAGACTGAGGATGGTTTTGTAGAAGATGCTGAAGGTGATTGGACACCAACCAACCAATCCTCGTGTATGGTTCAGAGTCAGTGGTCTTGGACTAACTCTCCGGCCTCTAACAAATGGGGTAGGACTTGGCAAGCCTACAGATTTAGAAGACACTTTTTCCCAGACAACATCGATAACCAATTTGATGATGGCAACTCTGTAGTAGAAACCAAAAGCAGATTGCGGGGAAGTGGTAAAGTCTTGTCTTTGTATATCACTACTGAACCTAAGAAGAACCTTCACATTTATGGTTGGTCTATGTTGGTGGATGTAAATGGAACAGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c9fddcc02df7561cc83f16a7b0c4007bad0d3d77d391bf3552d6f9a4a77f8300
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6384
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome analysis of a novel Pseudomonas aeruginosa phage O4 and identification of its receptor Zhang,F., Pan,X. and Yang,H. 2022-06-18 — GenBank