Protein

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Genbank accession
XSB47478.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,75
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MADLKLGTTLGGAGIWSASNLPLLPSGDRLLFKGWRVYTENDRPTAEDINALSTINGGVVAKNTTFNQNLVVGASLTANLIQSNSVLTIQRSANPAEMIFYRPDITATPSSEAWVLNMYAKDGLNRNMGSLIIAARTDGGNKVYLRANKDGSPNTSLTLDSQTQQVTVEQGSFRVIGTTNLGVTNAASMAVSGAVTANTVTPTNWANHDERYVTGIPRGMSGTSFGAAVVTEKNDVLSVGGNITDGPYGNTTYYGQVVNYRRSLNTGVSLVQTYFGNEMWFRLGTGSPGAWSWNQGDANGWRRVYDTVSPPTPAEVGAVNKAGDTMTGGLALLGDLTFRNLVNRHIRFEYTKNDGSTAVDAYIYKDGVDSPTRRAGLRINCATPNKASGNTSNSGDFIFGENGNFTLPGGGMIVQDGLNQGVYCMSALSTTASGSKNYLRKFRGGNSDTIWHETVQGGTLRWATGNTDAQECMRLDGTSLVVQGNITSGNNFLAGGIIQTNGGSLYIRSSGGTHTWYQEPDGSERAVTWSDSSGIYRIRSNNNKAATWEFKNGMIYYSTPVNGSDHGLIRGVVDAGGWDQWTARSAGILLDVPNIHTSAYNIWKVTKWGTSHVAAMDIHRPSDSDSQTRVRIITNSGAYFYFNGSGEFTASGNGSFNDVYIRSDEKLKSNFNKIENALDKVELLNGMIYDKADHIGGEPTSREAGLIAQQLQSVLPEAVKTGEDTEGNEILTVSPTAAIALLVNAIKELREEVRELKSR
Physico‐chemical
properties
protein length:759 AA
molecular weight: 81614,58970 Da
isoelectric point:6,07060
aromaticity:0,08300
hydropathy:-0,36430

Domains

Domains [InterPro]
DC_0505
ATT
1–310
DC_0505 DC_1202
IPR030392
CHP
663–720
IPR030392 Coil
IPR030392
CHP
663–759
IPR030392
XSB47478.1
1 759
Architecture
ATT
STR
ATT 1-310 | STR 317-759
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XSB47478.1
1 759
Domain Start End Length (AA) Confidence
N-terminal 1 156 156 0,3715
Central domain 157 355 200 0,2080
C-terminal 356 759 403 0,8756
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-156
Central
157-355
C-terminal
356-759

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage D6b
[NCBI] 		3413496 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Cronobacter sp.
[NCBI] 		1888169 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XSB47478.1 [NCBI]
Genbank nucleotide accession
PV417214 [NCBI]
CDS location
range 159486 -> 161765
strand +
CDS
ATGGCTGATTTGAAATTAGGTACAACGCTGGGTGGTGCGGGTATCTGGAGTGCGTCAAACCTCCCTCTGCTGCCCTCTGGCGATAGATTGCTGTTTAAAGGGTGGAGAGTATACACAGAGAACGATCGCCCGACAGCGGAGGATATAAACGCCCTCTCGACGATCAACGGCGGTGTTGTTGCGAAGAATACTACATTCAATCAGAATTTGGTTGTTGGTGCTTCATTAACTGCTAACTTGATTCAGTCGAATAGTGTTCTTACCATCCAACGTAGTGCAAACCCTGCGGAAATGATTTTCTATCGTCCCGATATTACGGCAACCCCGTCATCGGAAGCATGGGTTTTAAACATGTATGCGAAAGATGGTTTAAATCGAAACATGGGTTCGTTGATTATTGCTGCCCGTACTGACGGCGGAAATAAAGTATATCTACGGGCGAATAAAGACGGTTCCCCTAATACAAGTTTAACGCTGGATTCACAAACCCAACAGGTAACAGTTGAGCAAGGATCTTTTCGCGTAATCGGTACTACGAATCTGGGTGTGACGAACGCTGCATCAATGGCGGTTAGCGGTGCGGTAACTGCGAATACAGTAACCCCGACAAACTGGGCTAATCATGATGAACGTTATGTTACTGGTATTCCGCGCGGTATGTCTGGAACAAGTTTCGGTGCTGCTGTAGTAACTGAAAAGAACGATGTTCTGTCAGTAGGCGGTAACATCACTGACGGCCCGTATGGTAACACTACGTATTACGGGCAGGTTGTCAACTATCGCCGTAGCCTGAATACTGGGGTTTCATTAGTTCAAACATACTTCGGGAACGAAATGTGGTTTCGTCTTGGAACAGGTTCTCCGGGTGCGTGGTCATGGAACCAGGGCGATGCTAATGGTTGGCGACGTGTTTATGATACGGTCAGTCCACCAACTCCGGCAGAAGTAGGGGCGGTGAACAAAGCTGGTGATACAATGACTGGTGGTTTAGCGTTACTTGGGGATTTGACCTTCCGAAATTTGGTAAATCGTCATATTCGTTTCGAATACACCAAAAACGACGGTTCTACCGCTGTTGACGCTTATATCTATAAAGATGGTGTAGATAGCCCTACTCGTCGTGCTGGACTTCGCATTAACTGTGCCACACCTAACAAAGCGAGCGGGAATACTTCAAACTCAGGTGATTTTATATTCGGGGAGAATGGTAACTTTACACTACCTGGTGGCGGTATGATTGTTCAGGACGGATTGAACCAGGGTGTTTATTGTATGAGTGCATTAAGCACAACCGCAAGTGGATCTAAGAACTACTTACGTAAATTCCGTGGTGGTAATAGCGACACGATCTGGCATGAAACTGTTCAGGGCGGTACGTTGCGTTGGGCTACTGGCAACACTGATGCACAGGAATGTATGCGCCTTGATGGAACAAGTTTAGTAGTTCAAGGCAACATCACGTCAGGAAACAATTTCTTGGCTGGTGGTATCATACAAACGAACGGCGGTTCTTTGTATATCCGAAGCTCTGGCGGTACTCATACGTGGTATCAAGAACCAGACGGTTCTGAACGTGCTGTTACATGGTCTGATAGTTCTGGTATCTATCGAATCCGTTCAAACAATAACAAGGCTGCTACGTGGGAATTTAAGAATGGTATGATCTATTATTCTACCCCAGTAAACGGAAGTGACCACGGTTTGATTCGAGGTGTTGTTGATGCTGGCGGTTGGGATCAGTGGACTGCTCGATCTGCTGGTATTCTGCTGGATGTACCAAATATCCATACCAGTGCTTATAATATCTGGAAAGTGACGAAGTGGGGAACCTCTCATGTTGCTGCGATGGATATTCACCGTCCTAGCGATAGTGATTCACAGACGCGAGTTCGTATTATTACAAACTCCGGTGCGTACTTCTACTTTAACGGTTCTGGTGAATTTACTGCATCTGGTAACGGTAGCTTTAACGATGTGTATATTCGTTCTGATGAAAAACTGAAAAGTAATTTCAATAAGATTGAAAATGCATTAGATAAAGTTGAACTGTTGAATGGTATGATCTACGATAAAGCGGATCATATCGGTGGTGAACCTACTTCCCGTGAAGCTGGTTTGATTGCGCAACAATTGCAATCAGTATTACCGGAAGCTGTTAAAACTGGCGAAGATACAGAAGGAAATGAAATCTTAACTGTTTCTCCGACCGCTGCGATCGCTTTGTTGGTTAACGCGATTAAAGAACTCCGTGAGGAAGTCAGGGAACTTAAATCCCGCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5b072a85dfc3813cd470fd3215aaf10f9bc7cef58e790713f0cfc7f12c1737d8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6200
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Application of a phage cocktail for the control of Cronobacter and their biofilm elimination on stainless steel surface Luo,D. and Zeng,H. 2025-11 — GenBank