Protein

View in Explore
Genbank accession
QBQ72449.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MSEYRNRTTGEVKTQGEIRRENPNMSLPRVWNSNVCDALDIDPVLAAPQPSAGQYQTVQRNGAVQDANNNWVQAWQVVDMFSDDAELGTKAEQEAAYQATLDARVAEQNRARRDSRLAETDFYALSDVTMSTEMTTYRQALRDLPSHSNWPNLNEEDWPTKP
Physico‐chemical
properties
protein length:162 AA
molecular weight: 18407,90750 Da
isoelectric point:4,58932
aromaticity:0,07407
hydropathy:-0,91975

Domains

Domains [InterPro]
DC_0635
STR
1–150
DC_0635
G3DSA:6.10.140.1310
STR
60–142
G3DSA:6.10.140.1310
IPR031893
ENZ
107–162
IPR031893
QBQ72449.1
1 162
Architecture
STR
ENZ
STR 1-150 | ENZ 151-162
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-1
[NCBI] 		2559280 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Rhodobacteraceae bacterium
[NCBI] 		1904441 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ72449.1 [NCBI]
Genbank nucleotide accession
MK613343.1 [NCBI]
CDS location
range 30624 -> 31112
strand -
CDS
ATGAGTGAATACAGAAACAGAACAACAGGCGAAGTTAAAACGCAAGGCGAGATACGCCGTGAGAACCCCAACATGTCCCTACCTCGTGTGTGGAACAGCAACGTGTGTGATGCACTAGACATTGACCCAGTGTTAGCTGCACCACAACCCAGCGCAGGGCAGTACCAAACAGTACAACGTAACGGTGCTGTACAAGATGCTAACAACAACTGGGTACAGGCTTGGCAAGTAGTGGACATGTTTAGTGACGATGCTGAACTAGGCACTAAAGCTGAACAAGAAGCAGCGTATCAAGCTACACTGGATGCACGAGTAGCAGAACAAAACCGTGCTAGACGAGATAGTAGACTAGCTGAGACAGACTTTTATGCTTTGTCGGATGTAACTATGAGTACAGAGATGACAACGTATAGACAGGCATTACGTGACCTCCCAAGTCACAGTAATTGGCCTAACCTTAACGAAGAGGATTGGCCTACGAAACCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
01967ccb4e3e9061555ab2167764367eaa31ed6bc01e5d6ba7815145bb84d34d
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,9379
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse, abundant and novel viruses infecting the marine abundant Roseobacter RCA lineage Zhang,Z.F., Chen,F., Chu,X., Zhang,H., Luo,H.W., Zhai,Z.Q., Yang,M.Y. and Zhao,Y.L. 2019 — GenBank