Protein

View in Explore
Genbank accession
YP_006990474.1 [GenBank]
Protein name
hypothetical protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MTNLVHKELGGMEDLLFGEGKAQQVRNGQPIEVTRIKLLYLIRSDAELTGLDGSRFPFVLKVAQDGAEFFRYNGSAYVPVQTGVTPYAPTLGLHFVGIYNDLAELQDGIKRPTGNLQAIVLTPSEKYFHSVGGAWVELAPVGAFHPTYLGVYDTVQDLEVAEPTAPVNSLAIISKAFWYKEASGWTKLQTEDLQTLAKRLDSLSTAVQAVESNLTQKIAGIHVEDEHNNAFDDITDLHIKGGRLEDQQGQSVTLNVEPSVGVSTGQVLGSAFYKAPTLEFPGAVVSPRDNGNILTIYPDKRHSVNGLKVDSWAFDSSVFDVTQDPSGSLKVGVKSSTIAVSAGSDVYTGIATLDFVNCEVKDLGAGVLSITPSVAWYNADSTTPLTGDVTVLPPLQLHKAGAKLTLDVKHDAYEQKKAPGLLVYAAPGTYLVGKPSDTFDHTGAFFPDQKQVSDDEFILAAPNLKAYGFQEWDGLDPNVTGGDDALVCIFAGFRGEAETDGRIRIYAARLDQLGRPAGYLYDTNGHIVGVERSYKAGEVLHDPSSPLVAAAVCDFTAIEYVKFFVETTFENGVACLDPAAFPTGLLIQGLAANSATGDARQQFELDTGVQLSLSKRYLGLGRFDTSFILQHNMPDTAATSTVVLPDGFSTQILGNGARASVSSGILNLSDSGDIVAFAPTVTFDSEETRLLQNKLVHVTGSVCSTVNAVRVYAMYWTGIPDVTMPIITGYSNSNIEFDPDWHVITDQFIPEMITGQMTPIDLTFTVPQTSNNYAIVVATIEMQSPNNLQLHSLRVDVPSPFTGWHVGLPSITAEQHLMLSPLSATLVQDNQGYKALRYTINDTPNQPMPCGVQVSGKLKTDLDASVNTIAGSTARGGEALLY
Physico‐chemical
properties
protein length:882 AA
molecular weight: 94909,64030 Da
isoelectric point:4,74591
aromaticity:0,08617
hydropathy:-0,05385

Domains

Domains [InterPro]
DC_0389
STR
1–882
DC_0389
Coil
Unmapped
193–213
Coil
YP_006990474.1
1 882
Architecture
STR
STR 1-882
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_006990474.1
1 882
Domain Start End Length (AA) Confidence
N-terminal 1 453 453 0,9941
Central domain 454 652 200 0,1716
C-terminal 653 882 229 0,3911
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-453
Central
454-652
C-terminal
653-882

Taxonomy

  Name Taxonomy ID Lineage
Phage Edwardsiella phage KF-1
[NCBI] 		1244856 Uroviricota > Caudoviricetes > Kafunavirus >
Host Edwardsiella tarda
[NCBI] 		636 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006990474.1 [NCBI]
Genbank nucleotide accession
NC_019420 [NCBI]
CDS location
range 35131 -> 37779
strand -
CDS
ATGACTAATTTAGTGCATAAAGAACTCGGCGGTATGGAAGACTTGCTGTTCGGCGAAGGCAAGGCGCAGCAAGTTCGTAACGGCCAACCCATTGAAGTCACACGCATAAAGCTGTTGTACCTCATTAGGTCAGACGCGGAGCTAACTGGGCTAGACGGTTCGCGGTTTCCTTTTGTACTTAAAGTCGCACAAGACGGCGCAGAGTTCTTTCGCTACAATGGCTCTGCGTACGTGCCTGTGCAGACTGGCGTCACTCCGTACGCTCCTACACTTGGCCTGCACTTCGTAGGTATATATAATGATCTAGCAGAGTTGCAAGACGGCATAAAGCGGCCTACTGGAAATCTACAGGCGATTGTGCTAACGCCAAGCGAGAAGTACTTTCATAGCGTAGGCGGCGCGTGGGTAGAGCTCGCGCCTGTAGGGGCTTTCCACCCTACGTATTTGGGTGTGTATGACACCGTGCAAGACCTAGAAGTTGCTGAGCCTACAGCACCTGTTAATAGCCTTGCCATTATCTCGAAAGCCTTCTGGTATAAAGAAGCGTCAGGCTGGACTAAGCTGCAAACAGAAGATCTGCAGACCTTAGCTAAGCGTTTAGACAGTCTATCTACGGCTGTGCAGGCTGTGGAGAGCAACTTAACCCAGAAGATCGCAGGTATTCACGTAGAAGACGAGCACAATAATGCCTTTGATGATATCACAGACTTGCATATTAAAGGCGGCAGGCTAGAGGATCAGCAAGGCCAAAGTGTTACGTTAAACGTTGAACCGTCTGTAGGTGTTAGCACAGGGCAAGTGCTGGGTTCTGCCTTCTACAAAGCTCCTACTTTAGAGTTCCCTGGCGCAGTAGTGTCACCTAGGGATAACGGCAATATCCTTACTATCTACCCTGACAAACGACACAGCGTTAACGGGCTGAAGGTAGACTCTTGGGCTTTTGATAGCAGCGTGTTTGATGTGACGCAAGATCCGTCTGGCTCACTTAAGGTTGGTGTAAAGAGTTCTACGATAGCTGTTAGTGCAGGCAGCGATGTGTATACTGGTATCGCTACGCTGGACTTTGTAAACTGCGAGGTTAAAGATCTTGGTGCAGGCGTATTAAGTATAACGCCTAGCGTTGCCTGGTACAACGCAGACAGCACTACGCCTCTCACTGGTGATGTAACCGTCCTACCTCCGTTGCAGCTGCACAAGGCAGGCGCTAAGCTCACTTTAGACGTGAAGCACGACGCGTATGAACAAAAGAAAGCTCCTGGCTTGTTAGTTTACGCAGCGCCTGGCACTTATCTTGTAGGAAAGCCTAGCGACACATTCGACCATACAGGCGCGTTCTTCCCAGACCAAAAGCAGGTATCTGACGATGAGTTTATACTCGCAGCCCCTAACCTAAAAGCCTACGGTTTCCAGGAATGGGACGGCCTAGACCCTAATGTAACAGGCGGAGATGACGCATTAGTATGTATATTCGCAGGATTTAGAGGTGAAGCTGAGACAGACGGTAGAATCCGCATCTATGCAGCTAGGTTAGACCAATTAGGTAGGCCCGCTGGGTACTTATACGACACCAACGGTCATATAGTTGGGGTAGAGCGATCCTATAAGGCAGGTGAAGTTCTACATGACCCCAGTTCACCTCTAGTAGCTGCGGCTGTTTGCGACTTCACAGCCATAGAATACGTAAAATTTTTCGTCGAGACTACCTTTGAGAACGGCGTCGCTTGTTTGGATCCTGCCGCATTCCCTACTGGCTTGCTTATTCAAGGTCTGGCGGCTAACTCGGCTACTGGGGACGCGCGCCAGCAGTTTGAGCTAGACACAGGTGTGCAACTTAGCTTGTCCAAACGCTACTTAGGTCTCGGCAGGTTTGACACTAGCTTCATCCTACAACACAATATGCCAGACACCGCCGCTACGTCCACTGTGGTGTTGCCGGACGGCTTCAGTACACAGATACTAGGTAATGGCGCACGCGCTAGTGTGAGCAGCGGCATATTGAACTTGAGTGATAGCGGCGACATTGTAGCATTCGCACCAACAGTAACGTTCGACTCTGAAGAAACAAGGCTGCTGCAGAACAAGCTTGTGCACGTGACAGGCTCTGTGTGCAGTACTGTGAATGCTGTGCGGGTCTACGCTATGTACTGGACAGGCATACCAGATGTGACTATGCCTATCATAACTGGCTATAGCAACAGTAATATAGAGTTTGACCCAGACTGGCATGTTATAACAGACCAGTTCATTCCTGAAATGATAACTGGGCAAATGACGCCTATTGACCTAACATTTACAGTTCCGCAGACCTCCAATAACTACGCTATTGTAGTCGCTACGATAGAGATGCAGTCGCCAAATAACTTACAGCTGCACAGTCTGCGCGTAGACGTGCCATCACCTTTCACTGGTTGGCATGTAGGTTTGCCTAGCATTACTGCTGAGCAGCACTTAATGTTGTCACCACTGTCTGCTACACTGGTTCAAGATAACCAAGGCTATAAAGCGCTGCGTTACACGATCAACGACACGCCTAACCAGCCTATGCCTTGTGGTGTACAGGTATCTGGCAAGCTAAAGACCGACTTAGACGCCTCTGTTAACACAATAGCAGGGAGTACCGCGAGAGGTGGTGAGGCGCTATTATACTAG

Genome Context

Genome Context

Tertiary structure

PDB ID
debb5692fd7e4849f8fb2b1c4756c554c745ed716d75c2931f84b3ac62bab87c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,4693
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50