Protein

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Genbank accession
WYW00926.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTRLTLATVNAEIAKFGGKETLVKGKGYFYWIGGRADADPQIWTSIYVAALNQMTLAQWLEDWKRNDDQYNKPTPDKETRKMAIRHVQTLAAPARPKPPTGAKAGGGKSIEERIEWNEGRIKEATAELKATKDPKAIDKIKKQIDIYKGNIAGFKKRMNPEKKPAPAKGPSGAAAKKRTTAAPAQETASPATDFAKSLKKGVRVLVNLGNTKEPSYFLGAITKNNASKGSVNVLFDDGDVAEVRAIKSKVGIVGIAIDKVRKSEVPADQIDKWLAGAATTTKTPASPKAAGEWTVKSIVAWLESAGYTKPEPTRLPTRFERKLPSGAVIQADVNMKKTVALTAMGKEGYVHYTVDSFAKLKNADSSLAKSAVVGTKVGNALIPPKKSGSPKPFSPAEARKVIGAIPGWKASNVKNKASATFTKDYPNGVTATAYVFPQYVSFEYPQGENDHISDLSKIAAYIKQIDDDQAVTPDQGKALDALAKALKGWPNKVLPRDADEDNFLLRGFEDVPEGVEDIEAYAISVFKKLKSVDNFKKSKMYHGDNTYSFSAGGTVGYVYFDEDGVGMVRATPFEE
Physico‐chemical
properties
protein length:575 AA
molecular weight: 62341,30950 Da
isoelectric point:9,49460
aromaticity:0,08348
hydropathy:-0,49322

Domains

Domains [InterPro]
DC_2252
STR
1–575
DC_2252
WYW00926.1
1 575
Architecture
STR
STR 1-575
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Pseudomonas phage vB_PpuM-Aura
[NCBI] 		3132641 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Pseudomonas putida KT2440 and
[NCBI] 		1481724 Heterolobosea > Eutetramitea > Lyromonadida > Psalteriomonadidae > Monopylocystis >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WYW00926.1 [NCBI]
Genbank nucleotide accession
PP496437.1 [NCBI]
CDS location
range 10194 -> 11921
strand +
CDS
ATGACCAGATTAACCCTAGCAACCGTCAACGCCGAGATCGCAAAGTTCGGTGGCAAAGAAACTCTGGTCAAGGGTAAGGGCTACTTCTACTGGATAGGTGGCCGTGCCGACGCCGATCCTCAAATCTGGACTTCCATTTACGTTGCTGCGCTGAATCAGATGACGCTGGCCCAATGGCTGGAAGACTGGAAGCGCAATGACGACCAATACAACAAACCTACTCCCGACAAGGAAACCCGCAAAATGGCTATCAGACACGTTCAGACCCTCGCAGCTCCTGCTCGTCCAAAACCGCCTACCGGTGCAAAAGCAGGTGGCGGCAAGTCAATCGAAGAGAGAATCGAATGGAATGAAGGTAGGATCAAGGAGGCTACTGCGGAACTGAAAGCCACCAAAGATCCGAAAGCTATTGACAAGATCAAAAAGCAGATTGATATCTACAAGGGTAACATCGCCGGTTTCAAGAAAAGGATGAACCCGGAAAAGAAACCAGCACCGGCCAAAGGTCCTAGCGGTGCTGCTGCCAAGAAGCGTACCACTGCTGCCCCTGCACAGGAGACTGCTTCCCCGGCTACCGACTTCGCCAAGTCGTTGAAGAAGGGCGTTCGTGTACTGGTCAATCTCGGCAACACCAAAGAGCCGTCCTACTTCCTCGGCGCCATCACCAAGAACAACGCCAGCAAAGGTTCGGTCAATGTGCTGTTCGACGACGGCGACGTTGCAGAAGTCCGTGCGATCAAATCCAAGGTCGGTATCGTGGGCATCGCCATCGATAAGGTACGCAAGTCGGAAGTTCCTGCTGACCAGATCGACAAGTGGCTGGCCGGTGCAGCTACAACGACTAAGACCCCTGCCAGCCCGAAAGCGGCGGGAGAGTGGACTGTCAAGTCTATTGTGGCGTGGCTGGAAAGTGCAGGCTATACCAAACCAGAACCAACTCGGCTTCCTACCCGGTTCGAAAGGAAGCTCCCGTCTGGTGCTGTGATTCAAGCAGATGTAAATATGAAAAAGACCGTGGCCCTAACCGCCATGGGTAAAGAAGGGTATGTACATTACACAGTTGACTCCTTCGCCAAGCTCAAGAACGCAGACTCTTCGCTTGCCAAGTCGGCTGTTGTCGGCACCAAGGTAGGGAACGCATTGATCCCGCCGAAAAAGTCGGGTTCACCTAAACCGTTCAGCCCAGCGGAAGCCCGGAAGGTCATCGGTGCTATCCCCGGCTGGAAGGCATCCAACGTGAAGAACAAAGCGTCAGCCACGTTCACCAAAGATTACCCGAACGGTGTCACCGCCACTGCTTATGTCTTCCCACAATACGTGTCGTTCGAATACCCGCAAGGTGAGAATGATCACATCAGCGACTTGTCCAAGATCGCAGCTTACATCAAGCAGATCGACGATGATCAAGCAGTAACACCCGACCAAGGAAAAGCACTGGATGCTCTGGCCAAAGCGTTGAAGGGTTGGCCGAACAAGGTCCTCCCACGGGATGCTGACGAAGACAACTTCCTGCTGCGTGGGTTTGAAGATGTTCCAGAAGGTGTAGAGGATATAGAAGCATATGCAATCTCGGTGTTCAAGAAACTGAAAAGTGTTGACAACTTCAAGAAGAGCAAGATGTACCACGGCGACAACACATACTCCTTCTCGGCTGGCGGCACCGTGGGCTACGTGTACTTCGATGAAGATGGCGTCGGCATGGTCCGGGCAACACCGTTCGAAGAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
9b4a1e060d76bd8ac02d19cd0fdb3b516379efdd92e9367ec0dbe24c67bde16f
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,6113
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Isolation and characterization of a phage collection against Pseudomonas putida Brauer,A., Rosendahl,S., Kangsep,A., Rikberg,R., Lewanczyk,A.C., Horak,R. and Tamman,H. — — GenBank