Protein

View in Explore
Genbank accession
QBQ72579.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,89
TF
Evidence RBPdetect2
Probability 0,55
Protein sequence
MANALQLRRGTTTQHNTFTGLAGEVTVDTDKETVVVHDGSTAGGFPLARASDLTNFDADTLDGKQLATIESEYQAFANTAAANVVDSAPGTLDTLNELAAALGDDPNFATTVTNSIATKMPLAGGTFTGNVSFGDNNKAIFGAGSDLQIYHDGSNSRVHDTGTGGLRLMGSEFVALQSNDGENLVVGSNNGAVQLYYDNATKLATTSTGIDVTGTVTMDGATTSANINFGDSDKAVFGAGNDLQIYHNGSHSYIAENGQGNLTVLAGNWYLNNASDTQNMMTAINGGAVKLFHNGAEKFETSSSGINVTGTVTTDGVFVDGTLDIEEVFEKVSTNTTTSGTYSEAVTGGGVYYLTNNQTANRTINFTGVNSALATGQSVTVSVLATQGSTAYYFNAYQVDGSAVTPKWSGGSAPTAGNASGIDVYTFTIIKTANATFTVLASQTQYA
Physico‐chemical
properties
protein length:447 AA
molecular weight: 46124,55540 Da
isoelectric point:4,31206
aromaticity:0,08054
hydropathy:-0,16309

Domains

Domains [InterPro]
G3DSA:2.10.10.30
ATT
1–53
G3DSA:2.10.10.30 IPR051934
DC_0955
STR
1–225
DC_0955
IPR041352
ATT
6–41
IPR041352 DC_0955
QBQ72579.1
1 447
Architecture
ATT
STR
ATT 1-53 | STR 54-447
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Roseobacter phage CRP-3
[NCBI] 		2559282 No lineage information
Host Rhodobacteraceae bacterium
[NCBI] 		1904441 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Alphaproteobacteria > Rhodobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBQ72579.1 [NCBI]
Genbank nucleotide accession
MK613345.1 [NCBI]
CDS location
range 27230 -> 28573
strand -
CDS
ATGGCAAACGCACTTCAGCTACGCCGTGGCACTACCACTCAGCACAACACCTTCACGGGTCTAGCTGGCGAAGTCACGGTTGATACAGACAAAGAAACAGTAGTCGTACATGACGGCTCTACGGCTGGGGGCTTTCCTCTTGCCCGGGCCTCTGACCTAACTAACTTTGACGCAGATACCCTAGACGGGAAGCAGCTTGCTACTATCGAAAGCGAGTATCAGGCATTCGCAAACACAGCGGCAGCTAACGTAGTAGACAGCGCACCGGGTACGCTAGATACGCTAAACGAGTTGGCGGCGGCTCTGGGTGATGATCCTAACTTTGCCACCACAGTTACCAACAGTATCGCTACTAAGATGCCTTTGGCTGGCGGTACGTTTACTGGCAATGTGTCCTTCGGTGACAACAACAAAGCCATCTTTGGCGCTGGGTCTGACCTACAGATTTACCACGATGGGTCAAACTCGAGGGTTCACGATACGGGGACTGGTGGCCTACGTTTAATGGGTAGTGAATTTGTTGCCTTACAGAGTAACGATGGCGAAAATCTGGTTGTTGGAAGCAACAATGGAGCCGTTCAGCTTTACTACGACAACGCAACCAAACTCGCCACCACCTCCACAGGTATTGACGTAACTGGCACAGTCACAATGGACGGTGCTACAACATCTGCAAACATTAACTTCGGCGACAGCGACAAGGCTGTGTTCGGTGCAGGTAATGATTTGCAGATTTATCACAATGGGTCTCACTCGTACATCGCAGAAAACGGACAAGGCAACCTTACTGTTTTGGCGGGTAACTGGTACTTAAACAATGCCTCCGACACCCAGAACATGATGACCGCAATCAACGGCGGAGCAGTAAAGTTATTCCACAACGGCGCAGAGAAATTTGAAACGTCTAGCAGTGGAATTAACGTAACAGGCACAGTGACCACTGACGGCGTTTTTGTAGACGGCACTTTGGACATAGAGGAAGTGTTTGAAAAAGTATCGACTAACACGACGACAAGCGGCACATATTCGGAAGCTGTCACAGGTGGTGGTGTCTATTATCTGACTAACAATCAGACGGCAAACCGCACGATCAATTTCACAGGCGTAAACTCAGCACTTGCGACAGGTCAGTCAGTGACCGTATCAGTCCTAGCAACACAAGGCAGCACTGCCTACTACTTCAACGCTTACCAAGTAGACGGATCAGCGGTCACACCAAAATGGTCAGGCGGTTCCGCTCCAACAGCGGGCAACGCCTCTGGGATCGACGTATACACATTCACGATCATCAAGACGGCGAATGCTACTTTCACTGTGCTGGCTTCCCAGACGCAGTATGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
1d5e998fc413371879231bcb2f7524503061c7b9e09d34a810df90ce6d90a52e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8259
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diverse, abundant and novel viruses infecting the marine abundant Roseobacter RCA lineage Zhang,Z.F., Chen,F., Chu,X., Zhang,H., Luo,H.W., Zhai,Z.Q., Yang,M.Y. and Zhao,Y.L. 2019 — GenBank