Protein

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Genbank accession
ACO94240.1 [GenBank]
Protein name
putative tail protein
RBP type
TF
Evidence RBPdetect
Probability 0,85
Protein sequence
MPTITVLVAPEVVRNKPETERLHTVTGTAKGWEKTSLNQDPDEILTECKGLDALLTKSNLQADGVTKVDPTKPIGFEISYEIHDPSAVLTTGLTITPATAGGEVGQVVELLATVAPANATYQGVNWYSGDITKAVHIGGGKFKLLAPGSVTVYGVTIEGGHTDSTVITVAGALALSTDLAASQDVTAGADATFTIAATGGTTPYTYAWYFSDVPGGEGVVIDAGANATAATASLVITAVDAADEGEYWCVVEDADGHSVTSTRCEMAVV
Physico‐chemical
properties
protein length:269 AA
molecular weight: 27617,51450 Da
isoelectric point:4,32894
aromaticity:0,05948
hydropathy:0,13086

Domains

Domains [InterPro]
DC_0400
STR
2–269
DC_0400
G3DSA:2.60.40.1080
STR
86–170
G3DSA:2.60.40.1080 IPR013783
IPR003343
STR
91–160
IPR003343 IPR007110
IPR003599
STR
180–269
IPR003599
IPR036179
RBD
181–262
IPR036179
PF13927
STR
183–252
PF13927
cd00096
STR
191–262
cd00096
ACO94240.1
1 269
Architecture
STR
STR 2-269
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Shigella phage Ag3
[NCBI] 		637730 Uroviricota > Caudoviricetes > Pantevenvirales > Aglimvirinae > Agtrevirus
Host Shigella boydii
[NCBI] 		621 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ACO94240.1 [NCBI]
Genbank nucleotide accession
FJ373894 [NCBI]
CDS location
range 5503 -> 6312
strand +
CDS
ATGCCAACAATCACTGTATTAGTAGCACCGGAAGTTGTTCGCAACAAACCGGAAACCGAGCGTCTGCACACCGTGACAGGCACTGCCAAGGGTTGGGAAAAGACCAGTCTTAACCAAGACCCTGACGAGATCCTGACCGAGTGTAAAGGCCTGGATGCACTTCTGACCAAGAGCAATCTTCAGGCTGATGGCGTGACCAAAGTTGATCCAACCAAGCCTATCGGCTTCGAGATCTCTTACGAAATCCACGACCCAAGCGCCGTGCTGACCACTGGCCTGACCATCACCCCTGCGACTGCTGGTGGTGAAGTCGGTCAGGTTGTTGAACTGCTGGCGACCGTCGCTCCGGCGAACGCGACCTACCAGGGTGTCAACTGGTACTCTGGTGACATCACCAAAGCTGTACACATCGGCGGTGGTAAATTCAAGCTGCTGGCTCCTGGTTCTGTGACTGTGTACGGTGTTACCATCGAAGGTGGTCACACTGACTCTACCGTCATCACAGTGGCGGGTGCGCTGGCTCTGTCTACTGATCTGGCCGCTTCTCAGGATGTGACAGCAGGTGCTGACGCAACCTTCACCATCGCCGCTACAGGCGGCACTACCCCATACACATATGCTTGGTACTTCTCTGATGTCCCTGGCGGTGAAGGTGTGGTGATCGATGCTGGCGCTAACGCCACTGCTGCTACAGCAAGCCTGGTTATCACTGCCGTTGATGCCGCCGACGAGGGTGAGTACTGGTGCGTTGTTGAAGACGCCGACGGCCACTCTGTGACCTCCACCCGTTGTGAAATGGCTGTGGTCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
b3c987fdb3fb12f368564404ab98b1a9329193d70b8d268eb45b6060337ea4c4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7287
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A Shigella boydii bacteriophage which resembles Salmonella phage ViI Anany,H., Lingohr,E.J., Villegas,A., Ackermann,H.W., She,Y.M., Griffiths,M.W. and Kropinski,A.M. 2011 21595934 GenBank
Sequence of Vi-specific Shigella boydii phage phiSboM-AG3 Anany,H.E., Lingohr,E.J., Villegas,A., Kropinski,A.M., She,Y.-M. and Griffiths,M. 2011-05-19 — GenBank