Protein

View in Explore
Genbank accession
XFC52483.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,67
Protein sequence
MATIVDLPLSGANGSTSFPDNTGRAWSRPAISGNNAQIQNNALFLDGNNDVISTPSTADLVFENRPFVLEFEMNTSMPISASTAVIFDFDGNYSGGWLLGLRSNSAKVGLYNTSDGYVVETTMALNDGAWHKIRMEVTGRTVKLVVDGIDNASGVGNANMFSRDASVGGLRIGQGASASAQLAGSIRNVKITTTDPAPPLTHRPWFRRNYVGWDKVMAPRQVAMMPVRRHPDARIIVPRQFRLTRGVPPWWGSAGSTTQLPTYKIRGRVMIRDEVTGEDTPLPNIRVALFFRRLHTLIDIQLSDANGYVQFDNLMPGVQAYYGIAFDKDGTPLHNSVLWDRLSSEPGP
Physico‐chemical
properties
protein length:348 AA
molecular weight: 38054,57890 Da
isoelectric point:8,85501
aromaticity:0,08621
hydropathy:-0,23247

Domains

Domains [InterPro]
DC_2085
STR
2–195
DC_2085 SSF117074
G3DSA:2.60.120.200
STR
5–195
G3DSA:2.60.120.200
IPR013320
STR
41–193
IPR013320
IPR001791
LEC
65–194
IPR001791
IPR001791
LEC
65–191
IPR001791
IPR001791
LEC
82–192
IPR001791
DC_0374
STR
162–348
DC_0374
XFC52483.1
1 348
Architecture
STR
STR 2-348
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Stenotrophomonas phage vB_SmaS_BCU1
[NCBI] 		3240401 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Stenotrophomonas maltophilia
[NCBI] 		40324 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Lysobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XFC52483.1 [NCBI]
Genbank nucleotide accession
PQ111865.1 [NCBI]
CDS location
range 38116 -> 39162
strand +
CDS
ATGGCGACTATCGTCGATCTTCCGCTCAGCGGTGCCAACGGCTCCACCTCGTTCCCCGACAACACGGGGCGAGCGTGGAGCCGCCCGGCTATCAGCGGAAACAACGCGCAGATTCAGAACAACGCCCTCTTCCTCGACGGCAACAACGACGTTATTTCGACTCCGAGCACTGCCGACCTAGTTTTCGAGAACCGGCCGTTCGTCCTAGAGTTTGAGATGAACACGTCGATGCCTATTTCGGCTTCAACCGCAGTTATTTTCGACTTCGACGGAAACTACTCTGGCGGCTGGCTCTTGGGCCTTCGCAGCAACAGTGCAAAGGTCGGTCTCTACAACACGTCAGACGGCTACGTGGTGGAGACGACGATGGCGTTGAACGACGGCGCGTGGCACAAAATCCGAATGGAGGTCACGGGGCGGACGGTCAAGCTCGTAGTTGACGGCATCGACAACGCTTCGGGCGTCGGCAATGCGAACATGTTCTCACGTGACGCATCCGTGGGTGGTTTGCGAATCGGCCAAGGAGCCTCCGCTTCAGCGCAACTCGCGGGCAGCATTCGTAATGTAAAGATCACCACTACGGACCCTGCCCCGCCGTTGACGCACCGCCCTTGGTTCCGTCGAAACTACGTCGGCTGGGACAAGGTTATGGCCCCCCGCCAAGTGGCGATGATGCCGGTGCGCAGGCATCCGGATGCTCGGATCATTGTGCCGCGACAGTTCCGCCTCACGCGCGGCGTGCCGCCGTGGTGGGGGTCGGCGGGTTCGACGACGCAGTTGCCGACGTACAAGATTCGCGGCCGCGTGATGATCCGCGATGAAGTGACCGGCGAAGATACGCCGCTGCCGAATATCCGCGTCGCACTGTTCTTCCGTCGCCTGCATACGCTCATCGACATCCAGCTCTCCGATGCGAACGGGTACGTGCAGTTCGACAACCTCATGCCGGGCGTGCAGGCGTATTACGGTATCGCCTTCGACAAGGACGGCACGCCGCTGCACAACTCGGTTCTTTGGGATCGGCTGTCGTCCGAACCCGGTCCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
0cf823d01341092e0cf9625df93475a33a4d9b1b57b1d457f57489a7d453b17e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7402
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50