Protein

View in Explore
Genbank accession
WOZ53544.1 [GenBank]
Protein name
receptor binding tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
Protein sequence
MGFYAGRIGDKKVLSLTSGNNKDVNNHTNPGWDTIFHSDMPHVVVLETHERDLWDGGDWYRCTRMPDRIIQVLSADYDRVVLTEVEFEDGTRRFIYGTSLGVGAKAYNAYFSNTVGSQASAGTMASMKTNVCASADLHMDVSFYFEETPGTINEKLRDGTGCMYTWGVNSEWGDRGPGPPVGAPIRPNFETIIKAGWVLYRGAFSGNIAGSVSPPNRPLTIGADAMRHPWMRTTGVNSICLRGETLNRNIYGHMGPRYGKGSNPVGGPYAHNIQTESYQEVQYKAGFFRGPPNNFMGWENTDNNNAGSGWGNNAIYRDNNFRVPKRVRWYITNMKYNGQGFYAENVFGSRNQEIKISPREFIVNGINLMNTGWKFINQNDINYSPGNRPDIRVIATNVARFNGDATIGNNGYTQFNQPLTRPDNSAEFGQGNVSAMHVTTVGVYNFRSDAQWYVKSNPPEIGNQWGPVWSEATRPLRLVGGTGSADIGGNLRTSGNASHHLATLWLGVNNSRNGACVVTLDWKNDEWIAAAGIGCYNPLEDLTQWSEVDSRLRIFGNNFQKRVHQIMCLPVNMCVPFHFIRGTVVQCGVIPGHNAMQMKAMWAPATTNSATQGDYAITYWLVARADGSVEVWVNVEMSNIMNMRVILPEVRIAVQRLA
Physico‐chemical
properties
protein length:658 AA
molecular weight: 73133,25000 Da
isoelectric point:8,25726
aromaticity:0,10790
hydropathy:-0,41824

Domains

Domains [InterPro]
IPR059609
RBD
1–658
IPR059609
WOZ53544.1
1 658
Architecture
RBD
RBD 1-658
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WOZ53544.1
1 658
Domain Start End Length (AA) Confidence
N-terminal 1 42 42 0,0015
Central domain 43 241 200 0,5178
C-terminal 242 658 416 0,9233
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-42
Central
43-241
C-terminal
242-658

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage pKMKP103
[NCBI] 		3075954 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WOZ53544.1 [NCBI]
Genbank nucleotide accession
OR426634 [NCBI]
CDS location
range 35633 -> 37609
strand +
CDS
ATGGGGTTTTATGCAGGAAGGATAGGCGACAAGAAAGTATTGTCTCTCACCTCTGGCAACAATAAAGACGTCAATAACCATACAAATCCAGGTTGGGATACTATATTCCATAGTGATATGCCTCACGTTGTAGTTTTAGAAACTCACGAAAGAGACCTCTGGGATGGTGGTGATTGGTATCGTTGTACTAGAATGCCAGACAGGATTATTCAGGTACTGTCCGCAGACTACGACAGGGTTGTATTAACTGAAGTTGAGTTTGAGGATGGCACTAGACGTTTCATTTATGGTACATCCCTGGGTGTGGGCGCTAAAGCGTATAACGCTTACTTTAGTAATACTGTCGGTTCCCAGGCTTCTGCAGGTACTATGGCTAGTATGAAGACTAACGTTTGTGCTTCTGCAGACTTACACATGGATGTTAGTTTCTATTTTGAGGAAACTCCAGGTACTATTAATGAGAAGTTGCGCGATGGTACTGGGTGTATGTACACCTGGGGAGTAAACTCCGAGTGGGGTGACAGGGGGCCTGGGCCGCCGGTTGGAGCTCCTATACGTCCTAACTTTGAGACTATTATTAAAGCTGGATGGGTGCTCTATAGGGGGGCTTTTAGTGGCAATATAGCCGGTTCTGTGTCTCCGCCCAATAGACCACTTACTATTGGTGCTGATGCTATGCGCCACCCATGGATGCGTACTACTGGTGTTAACAGTATATGTTTGCGCGGTGAGACCCTCAATCGTAACATATACGGACACATGGGTCCTAGATACGGTAAGGGGTCTAATCCCGTTGGTGGTCCCTATGCTCATAACATCCAGACTGAGTCTTATCAGGAGGTTCAGTACAAAGCAGGCTTTTTCCGTGGTCCGCCCAATAATTTTATGGGGTGGGAAAACACAGATAACAACAATGCTGGTAGTGGTTGGGGTAACAATGCCATTTACCGTGACAATAACTTCCGTGTTCCTAAACGTGTTCGCTGGTATATTACTAATATGAAATACAATGGGCAGGGGTTCTACGCAGAGAACGTATTTGGCTCCCGCAACCAGGAGATTAAAATCAGCCCTAGAGAGTTCATTGTAAACGGTATAAACCTAATGAACACCGGGTGGAAGTTCATAAATCAGAACGATATAAACTACAGCCCAGGTAATAGACCGGACATCAGGGTTATTGCAACTAATGTTGCTAGATTTAATGGGGATGCTACTATTGGTAATAATGGGTACACCCAATTCAACCAGCCGCTGACTCGACCGGATAATAGTGCCGAATTTGGGCAGGGTAACGTTAGTGCTATGCACGTAACCACAGTTGGGGTATACAACTTTAGGTCTGATGCTCAATGGTACGTTAAATCCAATCCACCGGAGATTGGAAATCAATGGGGTCCCGTATGGTCTGAGGCAACTCGACCTCTCCGCCTGGTAGGTGGTACCGGCTCTGCTGATATTGGAGGGAACCTACGTACTAGCGGTAATGCTAGTCACCACCTGGCTACCTTGTGGTTAGGGGTTAATAACTCCCGAAATGGGGCTTGCGTCGTCACTCTAGACTGGAAAAACGATGAGTGGATCGCTGCTGCAGGGATTGGATGCTATAACCCTCTAGAAGATCTTACCCAGTGGAGCGAGGTAGATAGTAGGCTGAGAATTTTTGGAAATAACTTCCAGAAACGTGTGCATCAAATAATGTGTTTACCTGTTAACATGTGTGTGCCCTTTCACTTTATTCGTGGTACGGTAGTCCAATGTGGGGTTATTCCTGGGCACAACGCCATGCAAATGAAGGCCATGTGGGCGCCTGCTACTACTAACTCTGCTACTCAAGGCGACTATGCTATTACATACTGGTTGGTTGCCAGAGCTGACGGTAGTGTTGAGGTTTGGGTTAACGTTGAGATGAGCAATATTATGAACATGCGCGTGATTCTTCCTGAGGTTAGGATTGCTGTGCAAAGGCTTGCCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d632eacb3bfa4b4541c41b7e2f86e460d0a4692dbf01492b70053ba7040d698c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2393
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Diversified repertoire of phage defenses in Klebsiella pneumoniae: Bi-directional steering effects impacting antibiotic susceptibility Nang,S. and Li,J. 2023 — GenBank