Protein

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Genbank accession
YP_007517952.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MAIVNARNLVDSETRTVRMFEINNATNSNVVCVDASALRGHSSNPTLHIRSIKWNTTAATSDISLLFDASSNDHAISIHGSGEYGFHGKQPLITNPESSGVTGDILITNASAATGTIIIEVTKAKGYTASGQTR
Physico‐chemical
properties
protein length:134 AA
molecular weight: 14143,55370 Da
isoelectric point:6,49280
aromaticity:0,04478
hydropathy:-0,14627

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_007517952.1
1 134
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0010
Central domain 11 123 114 0,0002
C-terminal 124 134 10 0,9988
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-123
C-terminal
124-134

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC008M
[NCBI] 		1283076 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter ubique HTCC1062
[NCBI] 		335992 Bacteria > Proteobacteria > Alphaproteobacteria > Pelagibacterales > Pelagibacteraceae > Candidatus Pelagibacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007517952.1 [NCBI]
Genbank nucleotide accession
NC_020484 [NCBI]
CDS location
range 71393 -> 71797
strand +
CDS
ATGGCAATAGTAAACGCAAGAAATTTAGTAGATAGTGAAACGAGAACAGTAAGAATGTTTGAGATTAACAATGCTACTAACTCAAATGTAGTATGTGTGGACGCAAGTGCATTAAGAGGTCACTCGTCTAACCCAACACTACACATAAGAAGTATTAAATGGAATACAACGGCAGCAACAAGTGATATATCATTATTATTTGACGCAAGTTCAAACGACCATGCTATATCAATACATGGTAGTGGCGAGTATGGGTTTCATGGTAAACAACCATTGATAACAAATCCAGAAAGTTCAGGCGTAACAGGTGATATTTTAATTACCAACGCTAGTGCTGCTACTGGTACAATAATAATTGAAGTAACCAAAGCAAAAGGTTATACTGCCTCAGGACAGACTAGATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
82e63a8fc539ab6ce33590d682d9d42812ebbe1d660341ff05c70bb99e446c38
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5761
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50