Protein

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Genbank accession
AGH07659.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MDENYSLEQEQREYEIESNPELQRNELNPSVANTICFHEKVYKTLATVGDFICNVWYYDDNYDPLRSTEGSKRIHIVPTDELITDSVDVNHWFCVANDEWSQGVVLVNPIIRRNGVKFVSNNDLKDCVKYMTGVAAHYDANSGDIVAIDVADGNKMYEMSYDLSSSKIYSDISNNVYDDFTSGTVGNGSLSLSYDQKFGSGSISFNSLKNDLSGGNSISNYYRGSSVANISQNNNVPTSGSIAFSDFRNVVVKCTANCNGNWQHLQARWEVFGDSLWTSTLNKRVNLNGNFGGTSSDPALRFNNSGQGQIEVYVVNTNGNPCVRGYGGAGGGSNAGGGQGGRGGIHVASPIRMPNDHLNSRIRGGGGGGGGGGKGGKGGGGGHGGGRRCRGWFCNSSYRVCHNNGGEGGAGGNGGGGGRGAGYVWNGNNAFAAHTGAGGGGGAGGSGGSSRGGGRGGNGGNGGNGGGFESNGSQGGNGQGGSQGGGDEQGCGYRGSRSGQGGQGGGGGGGGAAKQSTSHNGSITNI
Physico‐chemical
properties
protein length:526 AA
molecular weight: 53943,37690 Da
isoelectric point:6,26590
aromaticity:0,08175
hydropathy:-0,64030

Domains

Domains [InterPro]
DC_1816
STR
195–252
DC_1816 PR01228 PR01228 PR01228 PR01228
AGH07659.1
1 526
Architecture
STR
STR 195-252 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGH07659.1
1 526
Domain Start End Length (AA) Confidence
N-terminal 1 331 331 0,0057
Central domain 332 515 185 0,4070
C-terminal 516 526 10 0,9740
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-331
Central
332-515
C-terminal
516-526

Taxonomy

  Name Taxonomy ID Lineage
Phage Cyanophage S-SSM6a
[NCBI] 		682650 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGH07659.1 [NCBI]
Genbank nucleotide accession
HQ317391 [NCBI]
CDS location
range 152719 -> 154299
strand -
CDS
ATGGACGAGAACTATTCTTTAGAACAAGAACAGAGAGAATATGAGATAGAATCTAACCCCGAACTGCAGCGGAATGAATTAAATCCTTCTGTGGCGAATACTATCTGCTTCCATGAAAAGGTATATAAGACTCTTGCAACGGTAGGAGACTTTATTTGTAACGTTTGGTACTATGATGATAACTATGACCCTCTGAGATCAACTGAGGGGTCTAAGAGAATACATATCGTTCCTACTGATGAACTTATAACTGATAGTGTAGATGTAAACCACTGGTTTTGTGTTGCCAATGACGAGTGGAGTCAAGGTGTAGTATTAGTCAACCCTATCATAAGGAGAAATGGAGTCAAGTTTGTAAGTAATAACGATCTAAAAGACTGCGTAAAATATATGACAGGTGTTGCAGCACACTATGATGCAAACTCTGGTGATATTGTGGCGATTGACGTGGCAGACGGAAATAAGATGTATGAGATGAGTTATGACTTATCTTCTTCTAAGATATACTCTGACATATCAAACAACGTCTATGATGATTTTACCTCTGGAACAGTTGGCAATGGTAGTCTAAGTCTATCATATGACCAGAAATTTGGCAGTGGTTCAATATCATTCAATAGTTTGAAGAATGACTTGTCAGGAGGTAACAGTATATCTAATTACTACAGAGGTAGTAGTGTCGCAAATATCAGTCAAAACAATAATGTACCTACCAGTGGAAGTATAGCATTCAGTGATTTTAGAAACGTAGTAGTCAAGTGTACTGCTAACTGTAATGGTAACTGGCAACACCTACAAGCAAGGTGGGAAGTATTTGGAGACTCATTGTGGACTTCAACTTTAAATAAAAGAGTCAATCTTAACGGTAATTTTGGCGGTACATCTAGCGACCCTGCACTACGATTCAATAACTCAGGGCAAGGGCAAATTGAAGTATATGTTGTTAACACCAACGGCAATCCTTGTGTGAGAGGATATGGCGGTGCTGGTGGTGGTAGTAATGCTGGTGGTGGGCAAGGTGGAAGGGGAGGAATCCACGTTGCATCACCAATTAGAATGCCCAACGATCACCTCAACAGTAGAATCAGAGGTGGTGGCGGAGGCGGCGGTGGCGGCGGCAAGGGCGGCAAAGGCGGTGGTGGCGGTCACGGCGGAGGTAGAAGATGTAGAGGTTGGTTCTGTAATAGTTCTTATCGAGTTTGCCACAATAATGGTGGTGAAGGTGGTGCTGGCGGCAATGGAGGCGGCGGAGGAAGAGGTGCTGGATATGTCTGGAATGGAAATAATGCTTTCGCAGCGCACACTGGCGCTGGTGGAGGTGGAGGAGCAGGCGGTTCAGGCGGTTCTTCTAGAGGCGGTGGCCGTGGAGGTAATGGCGGTAATGGTGGTAATGGAGGAGGATTTGAATCTAACGGTTCTCAAGGTGGTAATGGTCAAGGCGGTAGTCAAGGTGGAGGAGATGAACAGGGTTGCGGATACAGAGGAAGTCGCAGTGGTCAAGGTGGTCAAGGCGGTGGAGGAGGCGGTGGTGGTGCTGCCAAACAGTCAACCAGTCATAATGGAAGTATAACCAATATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
d5aa2e34c3cb643f7a8072ff0654a458c8394ad23ad7a7258c99acd58c4c38f4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,3598
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The Genome Sequence of Cyanophage S-SSM6a Henn,M.R., Sullivan,M.S., Osburne,M.S., Levin,J., Malboeuf,C., Casali,M., Russ,C., Lennon,N., Chapman,S.B., Erlich,R., Young,S.K., Yandava,C., Zeng,Q., Alvarado,L., Anderson,S., Berlin,A., Chen,Z., Freedman,E., Gellesch,M., Goldberg,J., Green,L., Griggs,A., Gujja,S., Heilman,E.R., Heiman,D., Hollinger,A., Howarth,C., Larson,L., Mehta,T., Pearson,M., Roberts,A., Ryan,E., Saif,S., Shea,T., Shenoy,N., Sisk,P., Stolte,C., Sykes,S., White,J., Yu,Q., Coleman,M.L., Huang,K.H., Weigele,P.R., DeFrancesco,A.S., Kern,S.E., Thompson,L.R., Fu,R., Hombeck,B., Chisholm,S.W., Haas,B., Nusbaum,C. and Birren,B. 2011-09-23 — GenBank