Protein

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Genbank accession
UYL04620.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,90
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MSMTPGYFYNNKGAAATTRMVFLSGSPANSASIDMTNTNYYSQTVDPYDCPGSSKLVVKHAGDMRTRMKIKYPNKVIFNCYSQFSGYCDIYISESGNDSYNGYSSSYPVKTLQEALLRCQPNYKNRIYIAAGNTVTTTKYYSDGLGPNRRFFENFDIQVIGDATTKPTLVIGEDSGWLSGVGVKDGRISFKNLNITLTLSSSTSAAAIAFGALVYVYGDCGVSFDNCTISGSDATYKPFLVSPAQRAGVVKLSLNSCSLSNMNIIQGSNISGLGLAYILNHYSCAFSSVAEGSTTAKIYSRAIA
Physico‐chemical
properties
protein length:304 AA
molecular weight: 32801,58720 Da
isoelectric point:8,76913
aromaticity:0,11513
hydropathy:-0,11217

Domains

Domains [InterPro]
DC_1757
STR
1–85
DC_1757 IPR011050
DC_0805
RBD
66–303
DC_0805
IPR012334
STR
89–301
IPR012334
UYL04620.1
1 304
Architecture
STR
STR 1-303 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
UYL04620.1
1 304
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0043
Central domain 11 286 277 0,8047
C-terminal 287 304 17 0,6037
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-286
C-terminal
287-304

Taxonomy

  Name Taxonomy ID Lineage
Phage Klebsiella phage KP13-2
[NCBI] 		2985659 Uroviricota > Caudoviricetes > Drexlerviridae > Webervirus KP132 >
Host Klebsiella pneumoniae
[NCBI] 		573 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
UYL04620.1 [NCBI]
Genbank nucleotide accession
OP617742 [NCBI]
CDS location
range 47875 -> 48789
strand -
CDS
ATGAGCATGACACCTGGTTATTTTTACAATAACAAAGGGGCAGCAGCCACCACACGCATGGTGTTTTTGTCAGGGTCTCCTGCAAACTCGGCAAGTATTGACATGACCAATACTAACTACTATAGCCAGACTGTTGACCCATATGACTGTCCTGGCTCCAGTAAGTTGGTTGTAAAACACGCTGGCGATATGCGAACCAGGATGAAAATTAAGTACCCTAACAAGGTTATTTTTAACTGTTACTCTCAGTTTTCTGGTTATTGTGATATTTACATATCGGAATCAGGTAATGACAGTTATAACGGGTATAGCTCAAGCTATCCAGTTAAGACATTGCAGGAGGCGTTACTTCGCTGCCAACCTAATTATAAAAACAGAATTTATATTGCTGCTGGTAATACGGTAACAACAACTAAATACTACTCAGATGGCTTAGGGCCAAACAGAAGGTTTTTTGAGAATTTTGACATTCAGGTTATTGGTGATGCAACAACCAAGCCAACTTTGGTTATTGGTGAAGATTCTGGCTGGCTATCAGGAGTTGGGGTTAAGGACGGAAGGATTTCATTCAAAAATTTGAATATTACTCTAACGCTATCCTCATCAACAAGTGCCGCAGCCATTGCATTTGGCGCTCTGGTTTATGTTTATGGTGACTGTGGGGTTTCATTTGATAACTGTACGATATCAGGAAGTGACGCCACTTATAAACCGTTCTTGGTGTCTCCCGCTCAGCGGGCTGGTGTGGTAAAACTATCGCTGAATTCATGCTCATTATCAAATATGAACATAATTCAGGGATCGAATATAAGCGGTCTTGGCCTTGCTTATATCCTAAACCACTATTCTTGTGCTTTTTCTTCAGTTGCTGAGGGTAGTACAACCGCTAAAATTTACTCGCGTGCAATCGCGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
e1db27c993f8a0f42cd9051ded787183f66a5abc26a6e704c942c46edc962b08
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6932
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Bacteriophage therapy against pathological Klebsiella pneumoniae that determine the clinical course of primary sclerosing cholangitis Ichikawa,M., Nakamoto,N., Kredo-Russo,S., Weinstock,E., Weiner,I.N., Khabra,E., Ben-Ishay,N., Inbar,D., Kowalsman,N., Mordoch,R., Nicenboim,J., Golembo,M., Zak,N.B., Suzuki,T., Miyamoto,K., Teratani,T., Fujimori,S., Aoto,Y., Konda,M., Hayashi,N., Chu,P.-S., Taniki,N., Morikawa,R., Kasuga,R., Tabuchi,T., Sugimoto,S., Mikami,Y., Shiota,A., Bassan,M. and Kanai,T. 2023-06 — GenBank