Protein

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Genbank accession
ALM02283.1 [GenBank]
Protein name
minor tail protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,91
Protein sequence
MAYDKQVWQNAPSTETPLSAGALNHMEDGIADAHTLAESKADSEHTHVLADVTDVVATAGEVNVLAGATVSTGELNTLDGVTSNVQTQLDGKAATSHTHAASSITSGTLDIARIPLGNSGSTVCVGNDSRLSDQRTPLDGSVSSAKIASGSITNTHVSPSAAIAASKMSAGVQASLTKADGSVQKSGTAEGMWMGTTLPGSGTTGVLYVVVP
Physico‐chemical
properties
protein length:212 AA
molecular weight: 21230,13880 Da
isoelectric point:4,89210
aromaticity:0,01887
hydropathy:-0,06557

Domains

Domains [InterPro]
DC_1940
STR
1–212
DC_1940
PF12789
STR
30–58
PF12789 PF12789
ALM02283.1
1 212
Architecture
STR
STR 1-212
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
ALM02283.1
1 212
Domain Start End Length (AA) Confidence
N-terminal 1 145 145 0,9121
Central domain 146 201 57 0,0540
C-terminal 202 212 10 0,9898
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-145
Central
146-201
C-terminal
202-212

Taxonomy

  Name Taxonomy ID Lineage
Phage Mycobacterium phage Cabrinians
[NCBI] 		1739967 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Mycobacterium smegmatis str. MC2 155
[NCBI] 		246196 Bacteria > Actinobacteria > Actinobacteria > Corynebacteriales > Mycobacteriaceae > Mycobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
ALM02283.1 [NCBI]
Genbank nucleotide accession
KT895281 [NCBI]
CDS location
range 23813 -> 24451
strand +
CDS
ATGGCTTACGACAAGCAGGTGTGGCAGAACGCGCCGTCAACGGAGACGCCGTTGTCGGCGGGGGCGTTGAACCACATGGAGGACGGCATCGCCGACGCCCACACTCTCGCCGAAAGCAAGGCGGACAGTGAGCACACGCATGTGTTGGCGGATGTCACGGATGTGGTGGCGACGGCCGGTGAGGTGAATGTGCTGGCCGGTGCGACGGTTTCGACTGGCGAGCTGAACACGCTCGATGGCGTGACCTCGAACGTTCAAACCCAGTTGGATGGGAAGGCTGCCACGTCGCACACCCACGCGGCATCATCCATCACGTCCGGCACGCTGGACATTGCCCGTATCCCGCTCGGCAACTCGGGCTCGACGGTGTGTGTGGGTAACGATTCGCGCCTGTCAGATCAACGCACACCACTCGATGGTTCGGTGTCGTCAGCGAAGATTGCATCCGGGTCGATCACCAACACCCACGTCAGCCCGTCCGCGGCGATCGCGGCGTCGAAAATGTCGGCGGGTGTGCAAGCATCGCTCACCAAAGCGGACGGGTCGGTGCAGAAGTCTGGGACCGCTGAGGGCATGTGGATGGGCACCACCCTTCCCGGTAGTGGAACCACGGGTGTGTTGTACGTGGTGGTGCCGTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
04b88ea1373a2e516e5d344dea3efa47c0ee5405267bcb6afa2048d8fa395217
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7993
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequence of Mycobacteriophage Cabrinians Chudoff,D., Conboy,A., Conboy,D., Atoulelou,M., Hasan,S., Martinez,A., Mastrando,J., Roy,R., Schmidt,R., Sheed,K., Smith,J., Sperratore,M., Struga,R., Starr,K., Suppi,R., Uguru,U., Terry,K., Villafuerte,R., Yuan,V. and Dunbar,D. 2016 26847904 GenBank