Protein

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Genbank accession
AYQ58177.1 [GenBank]
Protein name
putative VP1
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MERNTDNNFSLLPSVNIQRSKFHRTQSVKFTFNVGEVIPFYVDEVLPGDTFQIKTSKMVRLQTPAVPFMDDLFLDTYYFFVPNRLIWDDWQKFQGENDKTSWTPSTTYQVPSIEFPTPGNAIRDESLDNKVKIGEYDNLYFAPNSIADYMGLPTAAQRVSKFHDAVEPDFPLPLPSQNAGAPLAVNALPFRAYCKICNDWFRDENLSDPLFIDTSSNGGTGVWDNNNITVNMRSAYNGRNVPSIKSPCYGGAPFKASKYHDYFTSALPSPQKGADVTIPIDSNNGTPYYVSLEQGGSQYYIIRDSASGALTTSTSETNALQFGNMLTSGGLNITINSLRLAFATQAQYERDARGGTRYTEIIRSNFGVVSPDARLQRSEYLGGNHIPINVNQVVQQSGGAGVTGSFLGDTGAYSATTDSHGDFIQSFTEHGFVIGVCCVRYPHSYQQGIERFWLRHNRFDYYMPAFANLGEQPIYLQEIWPLNNSVWSEANTEYFGYQEAWADYRYKPNRVAGEMRSNIPNSLDFWHLADNYEARPHLSDKWIREDKSNVDRVLTVSSKVSNQLLADFYIDNISTRPIPMYSIPATLGDNF
Physico‐chemical
properties
protein length:591 AA
molecular weight: 66578,18320 Da
isoelectric point:5,18618
aromaticity:0,13029
hydropathy:-0,45939

Domains

Domains [InterPro]
IPR003514
STR
12–120
IPR003514 IPR003514
IPR037002
ATT
13–585
IPR037002
IPR016184
Unmapped
13–510
IPR016184
AYQ58177.1
1 591
Architecture
ATT
ATT 12-585 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AYQ58177.1
1 591
Domain Start End Length (AA) Confidence
N-terminal 1 478 478 0,5061
Central domain 479 580 103 0,0024
C-terminal 581 591 10 0,9941
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-478
Central
479-580
C-terminal
581-591

Taxonomy

  Name Taxonomy ID Lineage
Phage Microviridae sp.
[NCBI] 		2202644 Viruses > Monodnaviria > Sangervirae > Phixviricota > Malgrandaviricetes
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AYQ58177.1 [NCBI]
Genbank nucleotide accession
MG883718 [NCBI]
CDS location
range 1896 -> 3671
strand +
CDS
ATGGAACGTAATACTGATAATAATTTTTCTCTTCTCCCGTCTGTTAATATTCAGCGTAGCAAGTTTCATCGCACGCAGTCTGTAAAGTTCACTTTTAATGTTGGTGAAGTTATTCCCTTTTATGTTGATGAGGTTCTTCCTGGTGACACGTTCCAGATAAAAACCTCTAAAATGGTTCGTTTACAGACTCCTGCCGTTCCGTTTATGGATGACCTGTTTCTCGATACGTATTACTTCTTCGTTCCTAATCGCCTTATTTGGGATGACTGGCAGAAGTTCCAGGGCGAAAACGATAAGACTTCGTGGACACCCTCTACTACTTATCAGGTTCCCAGTATTGAGTTTCCTACTCCTGGTAATGCTATTCGCGACGAGTCTTTAGATAACAAGGTTAAAATTGGTGAGTACGATAATCTTTATTTTGCTCCCAATAGCATTGCTGATTACATGGGACTTCCTACTGCTGCTCAGCGTGTTTCAAAATTCCATGATGCTGTTGAGCCTGATTTCCCTTTACCTCTTCCCTCTCAAAATGCTGGTGCTCCCCTTGCTGTTAATGCTCTTCCTTTTCGTGCTTATTGTAAAATTTGCAACGATTGGTTCAGAGATGAGAATTTGAGCGACCCGCTTTTTATTGATACCTCTTCTAATGGCGGTACTGGTGTTTGGGATAATAATAATATCACTGTTAATATGCGTTCTGCTTATAATGGTCGTAATGTTCCCAGTATAAAATCCCCTTGTTACGGTGGTGCGCCGTTTAAGGCTTCAAAGTATCACGATTATTTCACCTCTGCACTTCCTTCTCCCCAGAAAGGCGCCGACGTGACTATTCCTATTGATAGTAATAATGGTACTCCTTATTATGTTTCACTTGAGCAGGGCGGCTCTCAGTATTATATTATTCGTGATAGTGCCTCTGGTGCTTTGACTACTTCTACAAGTGAAACGAACGCGCTCCAGTTTGGTAATATGCTTACTTCTGGCGGTCTTAATATTACTATTAACAGCCTTAGGCTTGCATTTGCTACTCAGGCTCAGTATGAACGTGATGCTCGTGGCGGTACTCGTTATACCGAGATTATTCGCTCGAATTTCGGTGTTGTGTCCCCTGACGCACGTTTGCAGCGTTCTGAATATCTTGGCGGTAATCATATTCCCATTAACGTCAATCAGGTTGTCCAGCAGTCTGGCGGTGCTGGTGTAACTGGTTCTTTCCTTGGTGATACTGGCGCATATTCTGCTACTACTGATAGTCACGGCGACTTTATCCAGTCTTTCACTGAACATGGTTTTGTTATTGGTGTTTGCTGTGTTAGATATCCCCACTCTTATCAGCAGGGCATTGAGCGTTTTTGGCTTCGTCATAACCGCTTTGATTATTATATGCCTGCATTTGCTAATCTTGGCGAACAGCCTATTTATCTTCAGGAGATTTGGCCTTTGAACAATTCTGTTTGGTCAGAAGCAAATACCGAGTATTTCGGTTATCAGGAAGCGTGGGCAGATTATCGTTATAAGCCCAATCGCGTTGCTGGTGAAATGAGGTCTAATATTCCTAATTCTCTTGATTTTTGGCATCTTGCCGATAATTATGAAGCTCGTCCTCATCTTTCTGATAAGTGGATACGTGAAGATAAGTCGAACGTTGACCGTGTTTTAACTGTTTCCAGTAAAGTTAGCAATCAGCTTCTCGCCGATTTTTACATCGACAATATTTCTACTCGTCCCATTCCCATGTATAGTATACCTGCTACTCTTGGTGATAATTTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
91546a4c16bf209cb620709b50345583a3ade389cd0a5ba69acbe24df25607d4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5303
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Viral metagenomics reveals the diversity of the Microviridae in the gut of mammalians and birds Zhang,W. 2019-01-01 — GenBank