Protein

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Genbank accession
AUR85539.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,79
TF
Evidence RBPdetect2
Probability 0,51
Protein sequence
MAITIGPPSTSVDEDTGSVTAAPTDAGGKYTIENSTGDPQVVISDTGIVIGGGVVSVSDSNNELTVNATQPVDSVVTAFSGATADADKKLATVGAINTNLSTKADISGQVFTGVVQATTLGATSSNAAQAIAIGNGGVDDTGNSGLAWRVGSASDARTGNYRAQMRFNYDNGLLELRTGNNSNVNSMGVALSIDSGQQVLVNGSPVLTELTGLTSSADSQLIDASLTISNPGTGDGYLELNNSTASADQRAYRLYATSAESLRIETVDGSGTSVNRYTFGHNGDLDLPGNMELAGYLSMFDAGGHEHRFEHGSEGIALRSLSNPADGESIFSVQSSGNSMRLNVPHVGDLTTSNEGIRVGTDPDGANGRTVLEEGNWALIQSAAAYSGTPFPTLTATDIVGWSGREVTFTGVGAVSFTMPTVVTGTPSGSQIKAGETMTLHNFNSVSSVTVNAAAGQKMVNGDSGNVSGTGGSITILAGNSVRMIASDESSVVAVGTICWLVRPFG
Physico‐chemical
properties
protein length:506 AA
molecular weight: 51431,70610 Da
isoelectric point:4,37259
aromaticity:0,04941
hydropathy:-0,08794

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR85539.1
1 506
Domain Start End Length (AA) Confidence
N-terminal 1 56 56 0,8287
Central domain 57 255 200 0,0626
C-terminal 256 506 250 0,9575
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-56
Central
57-255
C-terminal
256-506

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.076.O._10N.286.51.B7
[NCBI] 		2070720 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Shewanella
[NCBI] 		22 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Alteromonadales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR85539.1 [NCBI]
Genbank nucleotide accession
MG592452 [NCBI]
CDS location
range 21334 -> 22854
strand +
CDS
ATGGCTATTACTATAGGTCCACCATCCACCTCGGTAGATGAAGATACAGGCAGCGTAACAGCTGCGCCCACTGATGCCGGCGGCAAGTACACTATTGAAAATTCAACAGGAGACCCGCAGGTTGTAATTAGTGATACGGGCATAGTTATTGGCGGCGGCGTTGTTTCGGTGTCTGACTCAAATAACGAGTTAACCGTGAACGCAACACAGCCAGTAGATTCAGTAGTGACGGCATTTAGTGGCGCTACTGCTGACGCAGATAAAAAGCTGGCTACTGTTGGCGCTATTAATACCAACCTTTCAACAAAGGCCGATATTTCTGGGCAGGTTTTTACGGGAGTGGTTCAAGCTACCACTCTCGGCGCTACCTCTTCCAATGCAGCGCAGGCGATTGCAATCGGTAATGGCGGCGTTGATGACACAGGGAATAGCGGTTTAGCTTGGAGAGTTGGCTCGGCATCGGATGCGAGAACGGGGAATTACCGCGCTCAAATGCGCTTTAACTATGACAATGGGCTACTTGAGCTTAGAACTGGAAACAATTCAAACGTAAATAGCATGGGTGTTGCTCTTTCTATAGATTCAGGTCAGCAGGTTTTAGTTAACGGCAGCCCAGTACTAACCGAGTTGACAGGGCTTACAAGTTCGGCAGATAGCCAACTCATAGACGCTAGTTTGACAATTTCAAACCCTGGCACTGGCGATGGGTATTTAGAACTTAACAACTCAACAGCAAGTGCCGACCAAAGAGCCTACAGATTATACGCAACATCCGCAGAATCATTAAGGATTGAGACTGTGGATGGATCTGGAACCTCTGTAAACCGCTACACCTTTGGGCATAATGGTGATTTAGATTTACCAGGTAACATGGAGCTTGCAGGATACCTGAGCATGTTTGACGCAGGAGGTCATGAACATAGATTCGAGCATGGCAGTGAAGGCATAGCGCTAAGGTCGCTGTCTAATCCTGCCGATGGCGAAAGTATATTTTCAGTACAGTCTAGCGGTAATTCCATGCGGCTCAACGTGCCCCATGTTGGGGATTTAACAACATCTAACGAAGGTATACGAGTAGGTACTGACCCTGACGGCGCTAACGGTCGCACCGTACTAGAGGAAGGTAACTGGGCGTTAATTCAATCAGCAGCCGCTTACTCTGGGACGCCTTTCCCAACATTAACCGCCACTGACATAGTGGGCTGGTCGGGTAGGGAGGTTACTTTTACGGGTGTCGGTGCTGTATCGTTCACGATGCCAACAGTTGTCACTGGAACCCCTAGCGGGTCACAAATTAAAGCTGGTGAAACCATGACCCTGCATAACTTCAATAGCGTCTCTAGTGTTACTGTTAACGCTGCAGCAGGTCAGAAAATGGTAAACGGTGATAGCGGGAATGTGTCAGGCACAGGTGGAAGTATCACTATACTGGCAGGTAACAGTGTTCGCATGATTGCGTCAGATGAAAGCTCTGTTGTCGCGGTTGGCACAATTTGCTGGCTTGTTAGGCCGTTCGGGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
5108b27a9980ad7087919bf947acbf85da382b8037dea218f8d7007843a5e2af
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6590
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank