Protein

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Genbank accession
WCZ57180.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,89
Protein sequence
MGFFAGKYSDGKTVLSLNKVNGGDINAHKTPNANTIFHSDMPFVLVESTYESALSSAGNGFFVCQMPSVIANLKSNDPGRVILTAVEINGTHRGFLNGTQSQVGQFLAFFEDPPIGRAGAELGLTSAFASGNSLAHGTYTYNSSLGHEESIARQGTGGTISQASGFNLYRPGGAYAGEAIGRAWTLAGFPAGASKVSINSGNVDFWHPNWQAPIGAGKRGHNWFYVCNSNIRGYAGKKGTTPSNVSVLYNSSTYPNKVYVCRGSTSNLASQAAKKKYVQDSYNITPTKVIWYVLNLRYSNGGMSVASNPFTGSDIRISPSNFTIKGVSLPNTSYKFINQNAFGNLSSRPDMEYIGNNVAYTGVFGDTTARCEIVGSNKGSLWSPVNYGGSKSQISIYKFSAGKQWYVNSNNNTIGNEHGVVWGPSSVPLRLLPNNVASTYIGDDINPSYPGTGNKYVALSTVGLGLPNANSTVILTTEVVAGNLNTAGGPIRTYGGTAWQVQGRRQQSYTGGDGVFHQILTLPPNHLVPFHTTASYSYTQQWASRPDDLTFTRSGFIYTIKNLGNGNAELGVVIHANESAAVFLPRLRVTVQRLT
Physico‐chemical
properties
protein length:595 AA
molecular weight: 63617,15990 Da
isoelectric point:9,43999
aromaticity:0,10924
hydropathy:-0,24891

Domains

Domains [InterPro]
IPR059609
RBD
1–595
IPR059609
WCZ57180.1
1 595
Architecture
RBD
RBD 1-595
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WCZ57180.1
1 595
Domain Start End Length (AA) Confidence
N-terminal 1 10 10 0,0024
Central domain 11 209 200 0,0510
C-terminal 210 595 385 0,9868
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-10
Central
11-209
C-terminal
210-595

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Kenya-K16
[NCBI] 		3027604 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCZ57180.1 [NCBI]
Genbank nucleotide accession
OQ291030 [NCBI]
CDS location
range 103645 -> 105432
strand -
CDS
ATGGGTTTTTTCGCTGGAAAATATAGTGATGGTAAAACTGTATTATCACTAAACAAAGTGAATGGTGGGGATATTAATGCTCACAAAACTCCTAATGCCAATACTATATTTCACTCTGATATGCCATTTGTTCTAGTTGAGAGTACTTATGAAAGTGCATTAAGTAGTGCTGGAAATGGGTTTTTTGTATGTCAGATGCCTTCTGTGATAGCTAATTTAAAGAGTAATGATCCTGGTAGGGTTATACTAACCGCTGTTGAGATAAATGGTACTCATCGTGGTTTTTTGAATGGTACTCAATCCCAGGTTGGACAATTTCTTGCATTTTTTGAAGATCCCCCTATTGGCAGGGCTGGTGCTGAATTAGGTCTTACGTCAGCTTTTGCATCTGGTAATAGTTTGGCACATGGTACTTACACTTATAACTCTAGTCTAGGCCATGAAGAGTCAATAGCTAGGCAAGGTACTGGTGGTACTATATCACAGGCTTCTGGATTTAACTTATACAGACCTGGAGGGGCATATGCCGGTGAAGCTATCGGTAGAGCATGGACTTTAGCAGGATTTCCAGCTGGAGCATCTAAAGTATCGATAAATAGTGGTAATGTTGACTTCTGGCACCCTAATTGGCAAGCTCCTATAGGGGCTGGAAAAAGGGGTCATAATTGGTTTTATGTTTGTAACTCTAATATACGTGGATACGCGGGTAAAAAAGGCACTACGCCAAGTAATGTGAGTGTACTATATAATTCTTCGACCTATCCGAATAAGGTTTATGTATGTAGGGGCTCGACATCTAATTTAGCATCACAGGCAGCAAAGAAGAAGTATGTTCAAGATAGCTATAATATTACTCCGACCAAAGTTATTTGGTATGTGCTGAATCTTAGATACTCTAATGGTGGTATGAGCGTTGCTAGTAATCCTTTTACTGGGTCTGACATTCGTATAAGTCCTTCTAACTTTACTATAAAAGGTGTTAGTCTTCCAAACACTAGTTACAAATTCATTAATCAGAATGCTTTTGGTAACTTATCATCTAGACCTGATATGGAGTACATTGGTAATAACGTTGCTTATACCGGAGTCTTTGGAGATACTACAGCAAGATGTGAAATTGTAGGCTCTAACAAAGGTTCTTTATGGTCGCCTGTAAATTATGGAGGTTCTAAGTCTCAGATAAGTATTTACAAATTCTCTGCTGGTAAACAATGGTATGTTAATTCCAATAATAATACTATAGGTAATGAGCACGGAGTTGTTTGGGGGCCTTCTTCAGTACCTTTACGATTACTACCAAATAACGTAGCTAGTACTTATATAGGTGATGACATAAACCCTTCTTATCCAGGTACAGGGAATAAGTATGTAGCCCTATCTACAGTAGGTCTTGGATTACCTAATGCAAACTCTACAGTAATCCTAACTACTGAAGTAGTTGCCGGAAATCTTAATACAGCAGGAGGTCCTATACGAACATATGGTGGTACTGCGTGGCAGGTGCAAGGTAGAAGACAACAAAGTTATACAGGGGGTGACGGGGTATTCCATCAAATATTAACTTTACCACCTAATCATTTGGTGCCCTTCCATACTACAGCTTCTTATAGCTATACACAGCAGTGGGCTAGTCGACCTGATGATTTAACATTTACTAGAAGTGGATTTATTTATACTATTAAAAATTTGGGTAACGGTAACGCTGAATTAGGTGTAGTTATACATGCAAATGAATCCGCCGCAGTTTTCTTACCGAGATTACGAGTAACAGTTCAACGCCTTACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
f15b5691f027257351a8c2e04d62c1173a0c3cb530278bf2b02614d7d311faf3
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2468
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequence of Salmonella phage Kenya-K16 Gunathilake,D., Makumi,A., Loignon,S., Trembley,D., Labrie,S., Svitek,N. and Moineau,S. 2024-01-11 — GenBank