Protein

View in Explore
Genbank accession
AKF14296.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
Protein sequence
MTTPSVCVAENLVVGDDGKLRLAPWSVPRNVVDILARSGADTTKLLETSTLPGRLLIDVPPEAVLWTNTTPVDHMVRIVVTRRWKRWITSNPNAVQFRDRWSTAVTPAGNDAVMPAVPVVSGIFNSQCGSAGDLGSNTVAEPVPGKFWGWWGTNASEEWIEPVAPGDTLRVAYRCYVWTPPPFSDNANKNAPAHEAEAGYTRIQLTAFPKQGKLVTG
Physico‐chemical
properties
protein length:217 AA
molecular weight: 23589,50470 Da
isoelectric point:6,73129
aromaticity:0,08295
hydropathy:-0,17696

Domains

Domains [InterPro]
IPR055596
STR
3–212
IPR055596
AKF14296.1
1 217
Architecture
STR
STR 3-212 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Mycobacterium phage Vincenzo
[NCBI] 		1647301 Uroviricota > Caudoviricetes > Bclasvirinae > Coopervirus vincenzo >
Host Mycobacterium smegmatis str. MC2 155
[NCBI] 		246196 Bacteria > Actinobacteria > Actinobacteria > Corynebacteriales > Mycobacteriaceae > Mycobacterium

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AKF14296.1 [NCBI]
Genbank nucleotide accession
KR080194.1 [NCBI]
CDS location
range 35254 -> 35907
strand +
CDS
GTGACCACGCCCAGCGTTTGCGTAGCGGAGAACCTGGTCGTCGGTGACGACGGCAAGCTACGCCTGGCCCCGTGGTCGGTCCCGCGCAACGTCGTGGACATCCTGGCCCGCAGCGGCGCTGACACCACCAAGCTGCTGGAGACGTCGACGCTGCCCGGCCGTCTACTCATCGACGTGCCGCCGGAGGCCGTGCTGTGGACCAACACCACCCCGGTGGACCACATGGTGCGCATCGTGGTCACCCGGCGCTGGAAGCGGTGGATCACCAGCAACCCGAACGCGGTGCAGTTCCGTGACCGCTGGTCTACCGCCGTCACCCCGGCGGGCAACGACGCGGTGATGCCTGCGGTGCCGGTGGTGTCGGGCATCTTCAACAGCCAATGCGGCAGCGCCGGTGACCTGGGCAGCAACACCGTGGCCGAGCCCGTGCCGGGCAAGTTCTGGGGCTGGTGGGGCACCAACGCCAGCGAGGAGTGGATAGAGCCGGTGGCCCCTGGTGACACCCTGCGCGTGGCCTACCGCTGCTATGTCTGGACCCCGCCACCCTTCAGCGACAACGCGAACAAGAACGCCCCCGCCCACGAGGCCGAGGCGGGCTACACCCGCATCCAGCTAACGGCCTTCCCCAAGCAGGGAAAGCTGGTGACCGGATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4fbe7d0f8a2056c7863e6fd6527563dd488e18e536433989bb0f7ddaa5841f31
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,5251
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Genome Sequences of Mycobacteriophages AlanGrant, Baee, Corofin, OrangeOswald, and Vincenzo, New Members of Cluster B Pope,W.H., Carbonara,M.E., Cioffi,H.M., Cruz,T., Dang,B.Q., Doyle,A.N., Fan,O.H., Gallagher,M., Gentile,G.M., German,B.A., Farrell,M.E., Gerwig,M., Hunter,K.L., Lefever,V.E., Marfisi,N.A., Mcdonnell,J.E., Monga,J.K., Quiroz,K.G., Pong,A.C., Rimple,P.A., Situ,M., Sohnen,P.C., Stockinger,A.N., Thompson,P.K., Torchio,N.M., Toner,C.L., Ulbrich,M.C., Vohra,N.I., Zakir,A., Adkins,N.L., Brown,B.R., Churilla,B.M., Kramer,Z.J., Lapin,J.S., Montgomery,M.T., Prout,A.K., Grubb,S.R., Warner,M.H., Bowman,C.A., Russell,D.A. and Hatfull,G.F. 2015 26089409 GenBank