Protein

View in Explore
Genbank accession
YP_009304468.1 [GenBank]
Protein name
tail spike protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
TSP
Evidence RBPdetect2
Probability 0,95
TSP
Evidence UniProt/TrEMBL
Probability 1,00
Protein sequence
MSLTKPRCFRKASYLSQLGTLQNLANTGDDVLVIDVDYEFTNGETIDFKGRLVRIECEARFIGDGALIFTNMASGSVVEKPFMESKSTPLVIYPWTEDGKWITDAQAVAATLKRSKTEGYQPGVNDWVKFPGLEALMPQEVKDQYVVSTLDIRDCVGVEVRRAGGLMAAYLFRNCHHCKVIDSDTIIGGKDGIITFENLGGEWGIGNYAIGGRVHYGSGSGVQFLRNNGGASHNGGVIGVTSWRAGESGFKTWQGSVGAGTSRNYNLQFRDSVALSPVWDGFDLGSDPGMAPEEDRPGDLPVSQYPMHQLPNNHMVDNILVMNSLGVGLGMDGRGGYVSNVTVQDCAGAGILAYAFNRTFSNITVIDCNYMNFDSDQIIIIGDCIVNGIRAAGIKPQPSKGMIISAPNSTLSGIVGNVPPDRILAGNILDPVLGHTRINGFNSDSAELSFRIHKLTKTLDSGAIRSTLNGGPGTGSAWTEMTAISGSAPNAVSLKINRGDFKATEIPVAPTVLPDEAVRDHNSIALYFDQEALWALVKKPNGSLTRMKLA
Physico‐chemical
properties
protein length:550 AA
molecular weight: 59051,16670 Da
isoelectric point:5,56843
aromaticity:0,07818
hydropathy:-0,12473

Domains

Domains [InterPro]
IPR011050
STR
1–550
IPR011050
IPR012332
STR
2–550
IPR012332
IPR015331
RBD
3–550
IPR015331
YP_009304468.1
1 550
Architecture
STR
STR 1-550
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_009304468.1
1 550
Domain Start End Length (AA) Confidence
N-terminal 1 27 27 0,8737
Central domain 28 444 418 0,9877
C-terminal 445 550 105 0,9188
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-27
Central
28-444
C-terminal
445-550

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage BP12B
[NCBI] 		1543201 Uroviricota > Caudoviricetes > Autographivirales > Molineuxvirinae > Zindervirus
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009304468.1 [NCBI]
Genbank nucleotide accession
NC_031271.1 [NCBI]
CDS location
range 39966 -> 41618
strand +
CDS
ATGTCATTAACTAAACCGCGTTGCTTCAGGAAGGCAAGTTATCTTAGCCAATTAGGTACTTTGCAGAATCTGGCTAACACCGGAGATGATGTGCTTGTTATCGATGTTGACTACGAGTTCACTAATGGTGAGACCATTGACTTCAAAGGTAGGTTGGTTCGTATAGAGTGTGAAGCTAGGTTTATTGGTGATGGTGCTTTGATCTTCACTAATATGGCTAGCGGTTCTGTAGTAGAAAAGCCTTTCATGGAGAGTAAGTCTACCCCTTTGGTTATCTACCCTTGGACAGAAGATGGCAAGTGGATTACAGATGCACAAGCTGTTGCTGCTACATTGAAACGATCTAAGACAGAAGGGTATCAACCAGGAGTCAACGATTGGGTTAAATTCCCCGGACTTGAAGCATTGATGCCTCAAGAGGTGAAAGATCAGTATGTAGTATCCACACTGGACATCCGTGACTGCGTAGGTGTTGAGGTAAGACGCGCTGGCGGCCTTATGGCAGCTTACTTGTTCCGCAACTGTCATCATTGTAAGGTAATTGATTCTGACACCATCATTGGTGGTAAAGACGGAATCATAACCTTTGAAAACTTAGGTGGTGAATGGGGTATCGGCAACTATGCCATAGGTGGTCGTGTACATTATGGCTCAGGTAGTGGTGTGCAGTTCCTTCGAAACAATGGAGGTGCATCACACAATGGTGGCGTTATTGGTGTAACCTCATGGCGTGCAGGTGAATCTGGGTTCAAGACATGGCAAGGTTCTGTCGGTGCAGGTACGTCTCGTAACTATAACCTTCAGTTCCGTGATTCCGTTGCACTGTCTCCAGTGTGGGATGGCTTTGACTTAGGTTCAGACCCAGGAATGGCACCAGAAGAAGATAGACCAGGAGACTTACCTGTGTCTCAATACCCCATGCATCAGTTACCTAATAACCACATGGTTGATAACATCCTTGTTATGAACTCATTAGGTGTAGGTTTAGGTATGGATGGTAGAGGTGGTTATGTGTCGAATGTTACCGTGCAGGATTGTGCAGGAGCAGGTATACTTGCTTATGCATTCAACCGGACCTTCTCTAACATTACGGTGATTGACTGCAACTACATGAACTTCGATTCAGACCAGATAATCATCATTGGTGACTGCATCGTGAATGGCATCCGAGCAGCGGGTATTAAGCCTCAGCCATCCAAAGGCATGATCATCAGTGCACCTAACTCAACCTTGAGCGGTATTGTGGGTAATGTGCCGCCAGACCGTATTCTTGCAGGTAACATCCTTGACCCTGTGTTGGGTCATACAAGGATTAATGGGTTTAATAGTGACTCGGCGGAACTGAGCTTCAGAATCCACAAGCTTACCAAGACCTTGGATAGTGGTGCTATTCGCTCTACGCTGAACGGTGGGCCGGGTACTGGTTCTGCATGGACTGAGATGACTGCAATTTCAGGGTCAGCTCCAAATGCTGTCTCGTTGAAGATTAACCGTGGAGACTTCAAGGCAACTGAGATACCAGTAGCACCTACTGTGCTTCCAGATGAAGCGGTAAGAGACCACAACTCTATCGCACTTTATTTTGATCAGGAAGCTCTTTGGGCTTTAGTTAAGAAGCCAAACGGAAGCCTCACACGAATGAAGCTTGCTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
7c5b71cb17015f3ccb918ac4f545788c3f695b18defeecf609a42bd918b4d3fa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6706
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50