Protein

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Genbank accession
XOE93332.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence RBPdetect
Probability 0,88
Protein sequence
MSKKLKIYNKNNELLKESPYIEGSMGEITIDNLTPDTEYKEGDFKVCWDINGKETKHVNVPGFSTLKNSNEKILIVSYNVESPTTITAQNIEGLENSIDNYFYGSLYYDVVGIVNDSTEGKINGLKGEIRDKRISPLENKIGLFIGDSITEINGRTQNNYHGFIADRTGLEVHNMGISGTGYQDRKNVAYGITEQPDFICIMLGTNDYGVVGGNNRELGNSKEHRYGTVAGSIYYTYLQLSREFPTTPIVVLTPTPRIESNPYKENKNSKGYTLGELVQVIKDIAKLFSFPVLDLYNNSNLRVWDSNVNNVFFSSDNSPADGLHPNTTGHEWLSNLIQPFLELKAVLGSRIEKPIINHEIQDLGNNVFTKVIRPTGIFHKEDQSFIINIDKSDLDLSENKVLKVVYNNHQINDPNGILENSPYWYTLPNYEDGNEYNKNSIVSEFKKGLEITDIVDDGRVEYLRDYMTFYFTENSSTVKGSDINIEDDSSSVGEEINPTPTEPVITPLTPIDNGDGTLTVTLTPIKISWKQDQSFMININETQLDLSGKKVQHIDVSGTKLINPSETASNYFYWFSVSTSEEGTEFNRTEEINNFVTELESSSTEYDGRIVYKPIPVSITYK
Physico‐chemical
properties
protein length:622 AA
molecular weight: 70126,18960 Da
isoelectric point:4,76313
aromaticity:0,09807
hydropathy:-0,52299

Domains

Domains [InterPro]
DC_0614
ATT
1–160
DC_0614 DC_0605
IPR036514
STR
130–340
IPR036514
SSF52266
STR
135–341
SSF52266
IPR036514
STR
137–347
IPR036514
IPR051532
Unmapped
143–339
IPR051532
cd00229
ENZ
143–340
cd00229
IPR013830
ENZ
144–331
IPR013830
XOE93332.1
1 622
Architecture
ATT
STR
RBD
ATT 1-160 | STR 161-347 | RBD 348-622
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
XOE93332.1
1 622
Domain Start End Length (AA) Confidence
N-terminal 1 384 384 0,5673
Central domain 385 611 228 0,4202
C-terminal 612 622 10 0,1243
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-384
Central
385-611
C-terminal
612-622

Taxonomy

  Name Taxonomy ID Lineage
Phage Staphylococcus phage vB_ScoM-YCP
[NCBI] 		3389951 No lineage information
Host Staphylococcus cohnii
[NCBI] 		29382 cellular organisms > Bacteria > Bacillati > Bacillota > Bacilli > Bacillales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XOE93332.1 [NCBI]
Genbank nucleotide accession
PQ801475 [NCBI]
CDS location
range 16164 -> 18032
strand -
CDS
ATGTCAAAAAAACTTAAAATTTATAATAAAAATAATGAACTACTAAAAGAAAGTCCATATATTGAGGGTTCTATGGGAGAGATAACTATAGACAATCTAACACCTGATACTGAATATAAAGAAGGTGATTTTAAAGTATGTTGGGATATAAACGGTAAAGAAACAAAACATGTTAATGTTCCAGGTTTTTCTACTTTAAAAAACTCTAATGAGAAAATACTTATAGTAAGCTATAATGTAGAAAGTCCTACAACAATAACTGCTCAAAATATAGAAGGGTTAGAAAATAGTATAGATAACTATTTTTATGGTAGTCTTTATTATGATGTTGTAGGAATTGTAAATGATAGTACTGAAGGGAAAATAAATGGTCTTAAAGGTGAGATTAGAGATAAACGTATTTCTCCTTTGGAAAATAAAATAGGATTATTTATCGGTGATAGTATTACTGAAATAAATGGAAGAACCCAAAATAATTATCATGGTTTCATTGCAGATAGGACTGGTTTAGAAGTCCATAACATGGGTATTAGTGGTACAGGTTACCAGGATAGAAAAAATGTAGCATATGGCATCACAGAACAGCCTGATTTTATTTGTATTATGTTAGGTACAAATGATTACGGAGTTGTTGGAGGTAATAATAGGGAGCTAGGTAATTCTAAAGAACATAGATATGGTACTGTAGCAGGCTCTATCTATTACACGTACCTTCAGTTATCGAGAGAATTTCCTACTACCCCAATAGTCGTTTTAACTCCTACACCTAGAATAGAGAGTAATCCATACAAAGAAAATAAAAACAGTAAAGGATATACATTAGGAGAACTTGTTCAAGTTATTAAAGATATAGCTAAATTATTTTCTTTCCCTGTATTAGATTTATATAATAATAGCAATTTAAGAGTTTGGGATTCTAATGTTAATAATGTTTTTTTCTCTTCTGATAATAGTCCTGCAGATGGGTTACACCCTAATACAACAGGTCATGAATGGCTTTCTAACCTTATACAGCCTTTTTTAGAATTAAAAGCAGTATTAGGTTCTCGAATAGAAAAGCCTATAATAAACCATGAAATACAAGATTTAGGTAATAATGTATTTACAAAAGTAATAAGACCAACAGGGATATTTCATAAAGAAGACCAAAGTTTTATTATCAATATAGATAAATCAGATTTAGATTTATCTGAAAATAAAGTATTAAAAGTAGTATACAATAATCATCAAATCAATGACCCTAATGGTATATTAGAAAACTCACCTTATTGGTATACTTTACCAAATTATGAAGATGGAAATGAATATAATAAAAATAGCATCGTTTCAGAATTCAAGAAAGGTTTAGAAATTACAGATATAGTTGACGATGGTAGGGTAGAGTATTTAAGAGACTACATGACTTTTTACTTCACAGAGAATAGTAGCACTGTTAAAGGCTCAGATATAAATATAGAAGATGATTCTTCATCTGTTGGTGAGGAAATTAACCCAACACCTACAGAACCTGTTATAACTCCTCTTACACCTATAGATAATGGTGATGGTACTTTAACTGTTACTTTAACTCCGATTAAAATATCTTGGAAACAAGACCAAAGTTTTATGATTAATATTAATGAAACTCAACTTGATTTATCAGGTAAAAAAGTACAACATATTGATGTTAGCGGTACAAAATTAATAAATCCTAGTGAAACAGCTAGCAATTATTTCTATTGGTTCTCAGTCTCAACAAGTGAAGAAGGTACTGAATTTAATAGAACAGAAGAGATAAATAACTTTGTTACAGAACTAGAGTCAAGTAGTACAGAATATGATGGTAGAATTGTTTATAAACCTATACCTGTAAGTATAACATATAAATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0086702bf418eb8b4949f8f4046c06a702749d9073568d8b3259bd22af56ec49
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7241
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50