Protein

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Genbank accession
YP_006987103.1 [GenBank]
Protein name
regulator of chromosome condensation
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MLPFSRIIQYGNIAPAPGHIIKVQGSKFNQSNTIFLTSTGNLWAIGSNNSGMFGTGSSTALTQWTLIATNVKNFWCDSISSPGGVLLYITNDNKWFSSGIATALGINASSVMVFTDRTNIFGAVTYDNIKYLQLTYENINIVMKDGSMYTGGANGDGRLGLGNTNFGTFALRTDIGSVIQKARFNTTGTFYILRTDGTLAGSGNSTVFQLNPNVTRSTFINLNTEVLDFYVGTNNYFTKKIDGIYVAGTNNSGQNGNGSTAGTVTVPTLVTSIGNPDYIYSAYNSAVAYYNSTGEFKYWGDNTQGKIGTGSTSSYNVPTLHDKVLLPEFSHDETIYNDGWFINSSNSYILGTDNMIYVAGAIGTHTPGIGSNSYRFKPITLPLSI
Physico‐chemical
properties
protein length:385 AA
molecular weight: 41448,69270 Da
isoelectric point:6,89533
aromaticity:0,12208
hydropathy:-0,10727

Domains

Domains [InterPro]
DC_0433
ATT
1–132
DC_0433 IPR009091
IPR009091
STR
15–175
IPR009091
IPR009091
STR
28–327
IPR009091
IPR051210
Unmapped
32–320
IPR051210
YP_006987103.1
1 385
Architecture
ATT
STR
ATT 1-132 | STR 133-337 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_006987103.1
1 385
Domain Start End Length (AA) Confidence
N-terminal 1 120 120 0,1414
Central domain 121 361 242 0,6178
C-terminal 362 385 23 0,5463
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-120
Central
121-361
C-terminal
362-385

Taxonomy

  Name Taxonomy ID Lineage
Phage Cronobacter phage vB_CsaM_GAP32
[NCBI] 		1141136 Uroviricota > Caudoviricetes > Mimasvirus >
Host Cronobacter sakazakii
[NCBI] 		28141 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_006987103.1 [NCBI]
Genbank nucleotide accession
NC_019401 [NCBI]
CDS location
range 301 -> 1458
strand -
CDS
ATGTTACCATTTAGCAGGATAATACAATACGGGAATATTGCACCGGCACCTGGACATATTATTAAGGTACAGGGGAGTAAGTTTAATCAATCGAATACAATATTTCTTACTAGTACTGGAAATTTATGGGCGATAGGTTCTAACAATTCTGGTATGTTTGGTACTGGTAGCAGTACTGCATTAACGCAGTGGACATTGATTGCTACGAATGTAAAGAATTTTTGGTGTGATTCTATATCGTCGCCTGGTGGAGTACTGTTATATATAACGAACGATAACAAATGGTTTAGTTCAGGGATTGCGACGGCATTAGGAATAAATGCAAGTAGTGTGATGGTATTCACTGACAGGACGAATATATTTGGTGCAGTTACTTATGATAATATTAAGTACTTACAGCTTACGTATGAGAATATTAATATAGTGATGAAAGACGGTTCTATGTATACTGGTGGTGCAAACGGTGATGGAAGATTAGGATTAGGTAATACGAATTTTGGTACATTTGCGTTGAGGACTGATATAGGTTCAGTTATACAGAAAGCGAGGTTTAACACTACTGGAACATTTTACATTTTACGAACAGATGGAACATTAGCTGGATCGGGAAACAGTACTGTATTCCAATTAAATCCGAATGTAACGAGAAGCACATTTATAAATTTGAACACAGAAGTACTAGATTTTTATGTTGGAACGAATAATTACTTCACGAAGAAGATTGATGGGATATACGTAGCGGGCACTAATAATTCTGGACAAAATGGTAATGGTAGTACGGCGGGAACGGTAACAGTACCGACATTAGTTACATCTATTGGGAATCCAGATTATATATATTCTGCATATAACAGTGCAGTGGCTTATTATAACAGTACTGGAGAATTTAAGTATTGGGGTGATAATACACAAGGGAAGATTGGTACAGGTAGCACAAGCTCGTACAACGTACCGACATTACATGATAAGGTATTATTGCCGGAATTCAGTCACGATGAGACGATATACAATGATGGATGGTTTATAAATTCGTCGAATTCATACATATTAGGTACAGATAATATGATATACGTAGCGGGGGCTATTGGAACACATACACCGGGTATAGGTTCTAACAGTTATAGGTTCAAACCAATTACATTACCATTATCGATATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
72ab82d0060dfb18121ce671437ecc657bfbc17917ffea426aa9a0151fb02faa
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8732
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50