Protein

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Genbank accession
AUR92813.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MTIPKITPYTGGVANPDGSQTQTEFTQNMFDQLSYEANLSTELNNTVAGINDTAIQVDADATSASQSAAAAEAAVSGLDYQGLWPDTGGSANKGETWQTQTGGAPTGQYFTALQNTTADPISDDVNWREVIGVDSFSRYTDIVYKTVSDMIVSNFASSIDDGSIIKTARYNTDIVQFWMKVSSQPADFSGGYFVQGASAWFVMIQPGSNEIFAEHTGLNPLGNHANNKIAIETALLVAKEQGLGTVSFRDYASPKALVMCGSGIQLHRGIKLKMHGGDSGGAFLGGLVGDGNAPIFLTGTYTPGGSNTPSPIREITFENLSAANTNGHPVAEIYSPNFKAIQGRYKTQDSETLKFRYAFRATIRGGRHESTWTTFNEDNFTITAYDNVNGLLITPDTILSGGTNGGGVDVAQSQKVNINFIGESMGNFGIRVAGYDGLEAGNCNAVHIAAYLEKCPNSVSIGARNRVTGLVFGELWINQSALSSAPDYAILLGKVNGVTGGQGIVIAGHGTEPAIMFAKGAAGSGTLGPNDVYLEGVNVSNVASNYAIDPNLLNGEVAAAFNSGRVKIGDGRLTGNIREYLSDKIEANVGTPSSYRFIDPTDTSGFIDKVEILEASGSLTGAVLTIGDTINLLRNFNYDLGLSSPSNGYDDLSSEILVDNLRTSDPTLFRVAAGSGTGTFRFKITYRS
Physico‐chemical
properties
protein length:688 AA
molecular weight: 72703,69970 Da
isoelectric point:4,73630
aromaticity:0,08866
hydropathy:-0,16483

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AUR92813.1
1 688
Domain Start End Length (AA) Confidence
N-terminal 1 226 226 0,9900
Central domain 227 577 352 0,9914
C-terminal 578 688 110 0,9839
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-226
Central
227-577
C-terminal
578-688

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.177.O._10N.286.45.E10
[NCBI] 		1881402 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio sp. F12
[NCBI] 		2070776 Pseudomonadota > Gammaproteobacteria > Vibrionales > Vibrionaceae > Vibrio >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR92813.1 [NCBI]
Genbank nucleotide accession
MG592544 [NCBI]
CDS location
range 28942 -> 31008
strand +
CDS
ATGACAATTCCAAAAATTACACCATATACCGGCGGCGTTGCTAATCCAGATGGCAGTCAAACTCAAACTGAATTTACGCAAAACATGTTTGACCAGTTGAGTTATGAGGCTAATTTATCAACTGAGTTAAATAACACTGTTGCCGGAATTAACGACACGGCAATTCAAGTTGATGCAGACGCCACTAGCGCATCACAAAGTGCGGCTGCGGCTGAAGCTGCTGTTTCTGGCTTGGATTATCAAGGCTTATGGCCCGACACAGGCGGCAGTGCTAATAAGGGCGAAACATGGCAAACTCAAACAGGCGGCGCACCTACAGGTCAATACTTTACGGCACTACAAAACACAACTGCCGACCCTATTAGTGATGATGTGAATTGGCGTGAAGTTATTGGTGTTGATAGTTTTTCTAGATACACAGATATAGTTTACAAAACCGTATCCGACATGATTGTTTCAAATTTTGCATCAAGCATTGATGATGGATCAATAATTAAAACAGCGAGATACAATACTGATATCGTTCAGTTTTGGATGAAGGTTTCATCACAACCCGCTGATTTTTCTGGCGGTTATTTTGTTCAAGGGGCTTCTGCTTGGTTCGTCATGATCCAGCCAGGGTCTAATGAGATTTTCGCAGAGCATACAGGTTTAAACCCGCTTGGAAATCACGCCAACAATAAGATAGCAATTGAAACAGCCCTTCTTGTTGCGAAGGAACAGGGTTTGGGTACGGTATCGTTTAGGGATTACGCATCACCAAAAGCTTTAGTGATGTGTGGATCTGGAATTCAATTGCATCGTGGCATTAAATTAAAAATGCATGGCGGTGATTCTGGTGGCGCTTTCCTTGGTGGTCTTGTTGGTGATGGTAATGCTCCAATATTTCTAACCGGGACATACACGCCTGGTGGGTCTAACACACCCTCTCCAATACGCGAGATAACATTTGAAAACTTAAGCGCTGCAAACACAAATGGGCACCCCGTTGCAGAGATTTACAGTCCTAATTTCAAAGCTATTCAAGGAAGGTATAAAACTCAAGATTCCGAAACTCTAAAATTTCGCTATGCTTTCAGGGCTACCATTAGAGGTGGTAGGCACGAATCAACATGGACAACATTCAATGAGGATAACTTTACAATCACAGCTTACGATAACGTTAACGGACTATTGATTACTCCAGATACAATTCTTAGCGGCGGAACTAACGGCGGCGGTGTTGACGTAGCTCAAAGCCAGAAAGTAAATATCAATTTCATTGGGGAATCTATGGGTAACTTTGGAATCAGAGTTGCTGGATATGACGGACTAGAAGCTGGTAACTGTAATGCTGTGCATATAGCTGCTTACTTAGAGAAGTGTCCAAATTCAGTATCTATCGGCGCGAGAAATAGGGTTACTGGTCTTGTTTTTGGTGAGTTATGGATAAATCAATCGGCACTATCTTCAGCCCCTGATTATGCAATTTTACTAGGGAAAGTTAACGGGGTTACAGGTGGTCAAGGTATTGTTATAGCAGGTCACGGAACAGAGCCAGCAATAATGTTTGCTAAAGGAGCTGCTGGGTCAGGAACTCTAGGTCCTAACGATGTGTATCTGGAGGGCGTTAATGTGTCTAATGTTGCCAGTAATTACGCTATCGATCCAAACTTGCTAAATGGCGAGGTTGCCGCTGCATTCAACTCAGGAAGGGTTAAAATTGGCGATGGAAGATTAACAGGTAACATCCGAGAGTATTTATCAGACAAGATAGAGGCAAATGTTGGCACTCCATCGTCTTACAGGTTTATAGACCCGACAGACACATCAGGCTTTATAGATAAAGTGGAAATACTTGAGGCTTCTGGATCCCTTACTGGAGCTGTATTAACCATAGGTGACACTATTAATTTATTGAGAAACTTTAACTATGATTTAGGTCTATCATCTCCATCAAATGGTTATGACGACTTATCAAGCGAGATTTTAGTTGACAACCTAAGAACATCGGATCCAACACTATTCAGAGTTGCTGCGGGATCTGGAACTGGAACATTTAGATTTAAAATAACCTACAGGTCATAA

Genome Context

Genome Context

Tertiary structure

PDB ID
0560dcd58f90c683b4e0bc5de9881aa6e234bce308394f7c5a70500dc8511b5c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7540
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank