Protein

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Genbank accession
QLF88464.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence DepoScope
Probability 1,00
TF
Evidence RBPdetect
Probability 0,66
TF
Evidence RBPdetect2
Probability 0,88
Protein sequence
MTIYKDLKIGSSVNGTSQRYTYNITSSVSSVSGADANGNTLAYDSGFADVYLNGVRLSGADITITSGNAVSFASNLSNGDVVDIVAYGAFTVASVNADNLSSGTVPDARITGAYTGITNLTMSGDLTVDTDTLFVDSSNNRVGIGTNSPGFDFVVKDASGACTIRAENGADNKIVDLIADSTGGLLRTIGSYPLVFNTNQTERGRFDASGNFLVGTTSANPGIGNTNTGFSVTNGGGQVGNIAISQNGNYSANFNRNTSDGNVVQISKDGTVKHVITTTRMGIGNGNPQNKLDISALTWDDGILIKNTGNFNTGIIADANRTGAGGGILNLQGRWNGTEVTSILLQTGSDTTNKDDGEIVFRTASAGTPTERLRITSAGSVGIGTSSPQAVTEIVGGTGDIKALRLRTGDSTAGNNSGIDFQVLSSPTQGNRSSKITLDADGANSTGSDYFQFVKNGGSNQKIFFPSNDLIFEGSSEHVRITSAGRVGIGETSPDTTFHVNGGSTVAKFERDSGTNGSLTIGFPSTRATFDASGDLSIRNGGTERVRFHSGGIISATQGIALGVGTANTASNVLDDYEEGTWTPAVNSASGFSTGATNYSGTSAPRYTKIGNRVFLQAQVQMGNSSGNVALDDNIVITGLPFTPADVERNTVTEYRYNNNVAYMSSYLTSSGSILSVVRFLKGTTLRNGGSINININYTV
Physico‐chemical
properties
protein length:700 AA
molecular weight: 72467,31910 Da
isoelectric point:4,96241
aromaticity:0,07000
hydropathy:-0,22329

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QLF88464.1
1 700
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,7488
Central domain 141 339 200 0,1603
C-terminal 340 700 360 0,9402
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-339
C-terminal
340-700

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage Kolga EXVC016S
[NCBI] 		2736233 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter sp
[NCBI] 		2024849 Pseudomonadota > Alphaproteobacteria > Candidatus Pelagibacterales > Candidatus Pelagibacteraceae > Candidatus Pelagibacter >

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QLF88464.1 [NCBI]
Genbank nucleotide accession
MT375529.1 [NCBI]
CDS location
range 17296 -> 19398
strand +
CDS
ATGACAATATATAAAGATTTAAAAATTGGATCTTCAGTTAATGGAACTTCACAAAGATATACTTACAATATAACAAGTTCAGTTAGCAGTGTATCAGGAGCGGATGCAAACGGAAATACACTTGCATATGATTCTGGATTTGCGGATGTATATCTTAATGGGGTAAGATTATCTGGAGCCGATATAACAATAACTTCAGGAAACGCTGTTTCTTTTGCTAGTAATTTATCAAACGGAGATGTGGTTGATATTGTGGCTTATGGCGCTTTTACTGTAGCTTCAGTTAATGCTGATAATCTATCAAGTGGTACAGTACCAGATGCTAGAATTACTGGTGCTTATACAGGCATCACTAATCTTACAATGTCTGGAGATTTAACAGTTGATACAGATACTTTATTTGTAGATAGTTCAAATAATAGAGTTGGTATTGGAACAAATTCTCCAGGTTTTGACTTTGTTGTTAAAGATGCTTCTGGAGCCTGTACCATTAGAGCAGAGAATGGTGCTGATAATAAAATTGTAGACTTAATTGCAGACAGTACTGGTGGATTATTAAGAACAATAGGTTCTTATCCTTTAGTATTTAACACTAACCAAACAGAGAGAGGTAGGTTTGATGCGTCTGGAAATTTCTTGGTAGGAACTACAAGTGCAAATCCAGGAATAGGAAATACAAATACTGGATTTTCAGTTACAAATGGTGGTGGTCAAGTTGGAAACATAGCTATTTCACAAAATGGAAACTATTCAGCAAATTTTAACAGAAACACAAGTGATGGAAATGTAGTACAAATTAGTAAAGATGGAACAGTAAAACATGTAATCACAACAACACGCATGGGGATTGGTAATGGAAATCCACAAAATAAATTAGATATTTCTGCATTAACTTGGGATGATGGAATATTAATAAAGAATACTGGAAATTTTAATACTGGAATAATTGCTGATGCTAATAGAACTGGTGCAGGTGGTGGAATACTTAATTTACAAGGAAGATGGAATGGAACAGAAGTTACAAGTATTTTACTTCAAACAGGCTCTGATACAACTAACAAAGATGATGGAGAAATAGTTTTTAGAACTGCATCAGCAGGAACACCTACAGAAAGACTTCGTATTACATCAGCAGGTTCGGTGGGAATCGGAACTTCATCGCCACAAGCTGTTACCGAAATAGTAGGTGGAACTGGAGATATTAAAGCTTTAAGATTAAGAACTGGCGACAGTACAGCAGGAAATAATTCTGGTATTGATTTTCAGGTACTTTCAAGTCCTACTCAAGGAAACAGAAGTTCTAAAATTACTTTAGATGCTGATGGTGCAAATTCTACTGGTAGTGATTATTTTCAATTTGTTAAAAATGGTGGTTCTAACCAAAAAATATTCTTTCCTAGTAATGATTTAATATTCGAAGGCTCAAGTGAGCATGTTCGTATCACATCAGCAGGTCGTGTGGGTATCGGAGAAACTTCTCCAGATACTACATTTCATGTAAATGGTGGAAGTACTGTTGCAAAATTTGAAAGAGATAGTGGAACTAATGGAAGTTTAACAATAGGCTTTCCATCAACAAGAGCTACATTTGATGCTTCTGGAGATTTATCCATAAGAAATGGTGGTACTGAAAGAGTAAGATTTCATAGTGGTGGAATTATATCAGCTACGCAAGGTATTGCTCTTGGAGTAGGAACTGCAAACACAGCTTCAAATGTTTTAGACGATTACGAAGAAGGAACTTGGACACCTGCAGTTAATTCAGCAAGTGGATTTTCTACTGGAGCAACAAATTATTCAGGAACATCTGCTCCAAGATATACAAAAATTGGCAACAGAGTATTTTTACAAGCACAAGTTCAAATGGGAAATTCATCAGGAAATGTAGCACTTGATGACAATATAGTTATAACAGGATTACCTTTTACTCCTGCTGATGTTGAAAGAAATACTGTTACTGAATACAGATACAATAACAATGTAGCTTATATGTCTTCTTATCTAACTTCGTCAGGTTCAATTCTTTCAGTGGTAAGATTTCTTAAGGGTACGACTCTAAGAAATGGTGGCTCAATTAATATTAATATAAATTATACAGTTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
6c4ab137b0333ec3650f40502840a0b58409ecd50c92f1565266c48aadbd99a4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6723
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50