Protein

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Genbank accession
AII27501.1 [GenBank]
Protein name
tail tubular protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,88
TSP
Evidence RBPdetect2
Probability 0,94
Protein sequence
MTTENGFFTNQTQFQEDPNISQRDNLKGFYGTAVRPAYIEDLVAKAEEAAAKSYEYSQNSKQYRDEAEVIRDQTQVINDQTDQVYNDTVQVYNDTVSARDLALQYRDQALGYANAASQSATEAATSAANAEQSYQDTLAVVPSLQSQIDEKATKDELNEGITESQNDILGGSIFKGSNGEFVQDGDTVPAGTTHLRVLVGGKPTIVAMSPTSAGAVSSLTDFSATIGGTPVAFTKKNTSNYLTLNDALTSPYIALNSQIEVKERVNGSGGDGIKFDVVLTASVTPNGFDIIQSVSEPSLSLKMRNESRRFSSFGVVKESSNLSAFCRDVALNKYDANYLDYGTYNYSGNLFLADGQILSGKGSGNTISSNKGTRLKPTNADAKIRLFPHAKLSDVFIDGEYSESNKAVVGIYIKPHDSGDTDYVPGDPTTLSCIWTKVSNVNIQKFFNNISIEGESFNLWFENLVSVAGRFKQVGGGESTLTACNLSDTTGQEIVLNDGGKISVHGGAIQNTNGGYPCIINKGKMLLQGVYMENARAGANNNGYLIDNYGTLTLVQPKSMAIADKAIRGRYGSKTYLRDVEFTGNNANTNEVFNGRGDNNNEGGGYLYFENLTLRSCLTTSINYIEHAIGGYSDKGYSIECGNEKTLYLNEGANLTDLTSSGGTLTANNTAEYLTNGESLRFVAASSAPSVTLTKTLRGLSGHLVMVRWAVLAKPSASDNTRFLANIGGDVTCAYVNVEFDADSANGNTDKWYYITTSAVLDPQLTEHTITCNLFTSLGGSGASNGTSHIDRIELVDCGEVHKA
Physico‐chemical
properties
protein length:804 AA
molecular weight: 86445,27630 Da
isoelectric point:4,82372
aromaticity:0,08458
hydropathy:-0,36604

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AII27501.1
1 804
Domain Start End Length (AA) Confidence
N-terminal 1 321 321 0,9955
Central domain 322 639 319 0,9848
C-terminal 640 804 164 0,9856
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-321
Central
322-639
C-terminal
640-804

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage VPp1
[NCBI] 		1524880 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Vibrio parahaemolyticus
[NCBI] 		670 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AII27501.1 [NCBI]
Genbank nucleotide accession
KJ936628 [NCBI]
CDS location
range 18344 -> 20758
strand -
CDS
ATGACTACAGAAAACGGTTTCTTTACGAACCAAACACAATTTCAAGAAGACCCTAATATCTCACAACGAGATAACCTAAAGGGTTTCTATGGTACTGCTGTTCGTCCAGCTTACATTGAGGATTTGGTTGCTAAGGCAGAAGAAGCCGCAGCCAAGTCTTATGAATACAGCCAAAACTCTAAACAATATCGAGATGAGGCTGAAGTTATTCGTGACCAAACTCAGGTTATTAACGACCAAACAGACCAAGTATATAACGATACTGTACAAGTATACAATGATACAGTAAGTGCACGAGACCTAGCACTACAATATCGTGACCAAGCTCTAGGTTATGCTAATGCTGCTAGTCAATCAGCTACAGAGGCTGCTACAAGTGCTGCTAATGCAGAACAGTCTTACCAAGATACATTGGCTGTAGTTCCATCACTTCAATCTCAGATTGATGAGAAAGCTACCAAAGATGAATTAAATGAAGGTATTACTGAATCACAAAACGACATCTTAGGCGGTTCGATATTTAAGGGTTCTAATGGTGAGTTTGTTCAAGATGGCGACACAGTGCCAGCAGGAACTACACACCTTCGTGTTTTGGTTGGCGGCAAACCTACTATTGTTGCAATGTCTCCGACATCCGCAGGTGCTGTAAGTTCTTTGACGGATTTTAGTGCGACAATAGGTGGAACGCCCGTTGCTTTCACAAAGAAAAATACATCTAACTATTTAACTTTAAATGACGCATTAACAAGCCCATACATCGCACTAAACTCACAGATAGAGGTAAAAGAGCGAGTTAACGGTAGCGGTGGGGATGGAATAAAGTTTGATGTAGTTCTCACCGCATCTGTAACACCAAATGGATTTGACATCATCCAGAGCGTAAGCGAACCATCGTTGTCATTAAAAATGAGAAACGAATCAAGAAGATTTTCTTCTTTCGGCGTCGTAAAGGAGTCGTCAAACCTAAGCGCTTTCTGTCGAGATGTTGCACTTAATAAGTACGATGCTAACTATCTAGATTATGGAACGTACAATTACTCTGGAAATTTATTTCTTGCTGATGGTCAGATACTTAGCGGGAAAGGCTCAGGAAACACTATCTCATCAAACAAAGGAACAAGGCTAAAACCAACTAATGCTGATGCAAAAATTCGATTATTCCCGCATGCGAAATTGAGTGACGTTTTTATAGACGGCGAGTACTCGGAATCTAACAAAGCAGTGGTTGGCATATACATTAAACCTCACGACTCGGGTGACACTGATTATGTGCCGGGTGACCCGACCACGCTATCCTGTATTTGGACAAAGGTATCAAATGTAAACATCCAAAAATTTTTCAACAATATATCAATCGAAGGTGAATCGTTTAACTTGTGGTTTGAGAATCTTGTTTCGGTGGCTGGAAGATTTAAGCAAGTGGGTGGTGGAGAGTCAACATTGACAGCGTGCAACCTTTCAGACACAACAGGTCAGGAAATTGTGCTTAATGATGGTGGGAAAATCTCAGTTCATGGTGGAGCAATTCAAAACACAAACGGTGGATACCCTTGCATTATAAATAAAGGTAAAATGCTTCTTCAGGGAGTTTACATGGAAAATGCAAGAGCTGGCGCAAATAATAATGGTTATCTGATTGATAATTACGGAACGTTGACCCTAGTTCAGCCTAAGTCAATGGCAATAGCTGATAAAGCGATTCGTGGTAGATATGGCAGTAAAACCTATTTACGTGATGTGGAATTTACAGGAAATAATGCCAACACCAATGAAGTTTTCAACGGTCGTGGTGACAATAACAATGAAGGTGGTGGATACCTTTATTTTGAAAACTTAACCCTTAGAAGCTGTCTTACAACATCTATAAATTATATAGAACATGCTATAGGTGGTTATAGCGACAAAGGTTACTCTATTGAATGTGGTAATGAAAAAACATTGTATCTGAACGAAGGGGCGAATCTGACTGATTTAACATCTTCAGGTGGCACACTGACTGCAAACAATACAGCAGAGTATTTAACAAATGGTGAATCGCTTCGGTTTGTAGCAGCATCATCAGCACCAAGTGTCACGCTCACAAAAACATTACGTGGATTATCGGGTCACTTAGTTATGGTCAGATGGGCCGTTCTGGCTAAACCTTCAGCATCTGATAACACTAGGTTCCTAGCAAACATCGGTGGCGATGTAACTTGCGCTTATGTTAACGTTGAGTTTGACGCTGATTCAGCTAATGGGAATACTGACAAATGGTATTACATAACAACAAGCGCAGTTCTTGATCCTCAACTAACAGAGCATACTATCACATGTAATCTGTTCACGTCTCTTGGTGGCTCTGGAGCAAGTAATGGTACTAGCCATATCGACAGAATTGAGCTTGTTGATTGCGGTGAAGTTCATAAAGCATAG

Genome Context

Genome Context

Tertiary structure

PDB ID
3d86876f57c78447f5a61572a420efe6182f3c02b458d7d43bc76c7eeb9b797f
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7485
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50