Protein

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Genbank accession
QBJ05079.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect
Probability 0,90
Protein sequence
MAQAQYYTLLTEIGKAAIANATALGTRVDFAKIKVGDGGGSAYIPTETQTELKNVVWESTLEHVQADEKKPNWVVIQKTITGDTGSFTIREVGVFDSKDQLLAISSYPETYKPAPDSGTVKEILIKIILAVSNTASINLKIDPTVVLATLKDIQDLDTKIDTTKTELKSNIETTKTELNRKIGDTTQLTTTDKTNIVGALNEVKTSVDSIETTAEKTSYNNATSNLTATNVQGAIDEVVAKIEKFNEVNISIQNDMLPI
Physico‐chemical
properties
protein length:259 AA
molecular weight: 28084,35960 Da
isoelectric point:4,80775
aromaticity:0,04633
hydropathy:-0,24054

Domains

Domains [InterPro]
DC_1371
STR
1–255
DC_1371
IPR051934
Unmapped
3–246
IPR051934
IPR022225
ATT
4–150
IPR022225
QBJ05079.1
1 259
Architecture
ATT
STR
ATT 1-150 | STR 151-255 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Clostridium phage JD032
[NCBI] 		2530171 No lineage information
Host Clostridioides difficile
[NCBI] 		1496 cellular organisms > Bacteria > Bacillati > Bacillota > Clostridia > Peptostreptococcales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QBJ05079.1 [NCBI]
Genbank nucleotide accession
MK473382.1 [NCBI]
CDS location
range 18857 -> 19636
strand -
CDS
TTGGCACAAGCACAATATTATACATTACTTACAGAAATAGGTAAAGCGGCTATAGCAAATGCTACAGCACTCGGGACTAGAGTTGATTTTGCAAAAATAAAAGTTGGGGATGGTGGTGGAAGTGCATATATTCCAACAGAAACTCAAACAGAACTTAAAAATGTGGTGTGGGAAAGTACATTAGAGCATGTTCAAGCAGATGAAAAAAAACCTAATTGGGTAGTTATCCAAAAGACTATAACTGGAGACACTGGAAGTTTTACAATCAGAGAGGTTGGAGTATTTGACTCTAAAGACCAACTTCTCGCAATATCTAGCTATCCAGAAACTTATAAACCTGCTCCAGATTCGGGAACAGTAAAAGAAATATTAATTAAAATTATATTAGCTGTGTCTAATACAGCAAGTATAAATTTAAAAATAGACCCAACAGTTGTATTAGCAACTTTAAAAGATATACAAGACTTAGACACTAAAATTGATACAACTAAAACAGAATTAAAAAGCAACATAGAAACTACTAAGACAGAGTTAAATAGAAAAATAGGAGATACAACACAACTTACTACAACAGATAAAACAAATATAGTTGGTGCATTGAATGAGGTAAAAACTAGTGTAGATAGTATAGAAACAACAGCAGAGAAAACAAGTTATAATAATGCAACAAGCAATCTTACTGCTACGAATGTGCAAGGGGCGATTGATGAAGTTGTTGCAAAGATAGAAAAATTTAATGAGGTTAATATATCTATACAAAATGATATGTTACCTATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
268b0b066675ad0cf9526a1ea624c99868528714e32b1945d0e1051f7019a2c5
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8874
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
The global transcriptional response of Clostridium difficile hypervirulent RT078 to bacteriophage JD032 infection Li,T., Zhu,Y. and Guo,X. — — GenBank