Protein

View in Explore
Genbank accession
XPK43253.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,88
Protein sequence
MIVYNNQEPTTVNNVGQFGATEGSIGAYKQAAEYAADSKYWALLAESKFGTVDDLIAEVEKLYKQGILLQQDIEDLKQDFKDQDARLMQLIAQTNAAVANANNSIALINQKLIEVDQQLDILLAMKVTVTTLPPGSEATGSFNNQTGEIKLGIPEGDPGRDGSVTDLTTAPSGTPVLGDIGFYVDSEDNKVYKTTLNNIANLIPSVRSIKVNDGPEQTGDVALTLDKNTVGLGNVLNVAQYSRQEINDKFDKPIKIYQTKADADANAQYRQTGESVMVWEDTQYVFYTVAANKTLIPAKTEGRIVTVNSRSPDSSGNIDITIPTGNPSLYLGEMVMFPYDPAKSVSYPGVLPADGRLVSKESALDLGPSLVSGQLPVVSETEWQAGAKQYFSWGKLADGITDADSTNFINIRLPDWTGGEAIRSPDSVKDSTYKGSVQSQIPYVVTVNNQAPDEITGNVNISRSILGAASSGANSDITSLEGLTTALSVTQGGTGAKNTNDAKTNLGVDRMVQGSGETKILSPNKETYMFVDNNGWGCYRTTAGLVGTVALSVERGGTGATDIVSARDNLGLKSLSTLDTVPVTKGGTGASDAAEARSNLGLGSVATLSNVPIASGGTGAGDAAGARFNLGLGSVSTLSNVPIASGGTGASDAAGARINIGALSNAPANTGTGGTGARVQHATGSGLFTLDMFNCYWYMQPEDTNFWVAHGVSYAGANGEASDYGRISYAIKIADGTTKYVHCLTNKNTTIDTGGFIKAASPVVNIYTNGQYETNDESEGVSVIRQGIGEYLITGCLGLNSDARWGGVDGGFEIPTDRNKQPRIWLDYEVKEDGSILVKTYHRTHPTSPVFARNEIEGFADGDPIDIPSDAFISVRVEMPSK
Physico‐chemical
properties
protein length:882 AA
molecular weight: 93140,27160 Da
isoelectric point:4,61865
aromaticity:0,06916
hydropathy:-0,26213

Domains

Domains [InterPro]
Coil
Unmapped
73–93
Coil DC_0709 DC_0709
DC_1205
STR
604–641
DC_1205 IPR058008
XPK43253.1
1 882
Architecture
STR
STR 183-882
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage StefiGeyer_Bas88
[NCBI] 		3398435 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
XPK43253.1 [NCBI]
Genbank nucleotide accession
PQ850628.1 [NCBI]
CDS location
range 8747 -> 11395
strand +
CDS
ATGATCGTTTATAACAACCAAGAACCTACTACAGTAAATAATGTAGGCCAATTTGGTGCAACAGAAGGCTCTATCGGAGCCTATAAACAAGCAGCTGAGTATGCTGCTGATTCTAAATATTGGGCACTTTTAGCTGAGTCTAAGTTTGGTACAGTTGATGATCTTATTGCTGAAGTAGAGAAACTTTATAAGCAGGGTATTCTGTTACAGCAAGATATTGAAGATCTGAAACAGGACTTTAAAGATCAAGATGCTCGACTGATGCAATTGATTGCACAGACTAACGCAGCTGTTGCTAATGCTAACAACTCTATTGCTTTGATTAACCAAAAACTGATTGAAGTCGATCAGCAACTTGATATCCTGTTGGCTATGAAAGTTACAGTGACCACTCTTCCTCCGGGTTCTGAAGCTACTGGTTCTTTCAATAACCAAACTGGTGAAATCAAGCTAGGTATTCCTGAAGGTGATCCGGGTCGTGATGGTTCTGTAACTGATCTAACTACAGCACCTTCAGGTACTCCTGTTCTTGGTGACATTGGGTTCTATGTAGACTCGGAGGATAATAAAGTCTACAAAACAACCCTAAATAACATTGCTAATTTGATCCCTTCTGTTCGTTCTATCAAAGTTAACGATGGTCCAGAACAAACTGGAGATGTAGCTCTCACTCTTGATAAGAATACAGTTGGACTAGGTAATGTTTTGAACGTTGCTCAATATAGTCGTCAAGAGATTAATGACAAATTCGATAAACCTATTAAAATATATCAAACTAAAGCTGATGCTGATGCAAATGCTCAATATCGTCAGACAGGCGAATCTGTTATGGTTTGGGAAGATACTCAATATGTTTTCTATACTGTCGCAGCTAACAAAACACTAATTCCAGCTAAAACCGAAGGTCGTATTGTTACAGTTAACTCTCGATCTCCTGACTCGTCTGGTAACATTGATATTACTATCCCTACAGGGAACCCTTCTCTGTATCTTGGTGAGATGGTTATGTTCCCATACGATCCAGCTAAGAGTGTTTCTTATCCGGGTGTACTACCTGCTGATGGTCGCTTGGTTTCTAAGGAAAGTGCTTTAGATTTAGGTCCATCTTTGGTCAGTGGTCAATTGCCCGTAGTTTCTGAAACAGAGTGGCAAGCTGGTGCAAAACAGTATTTCTCTTGGGGTAAATTAGCAGATGGTATAACTGATGCAGATTCCACTAATTTTATTAATATTCGCCTACCAGATTGGACAGGTGGGGAAGCTATACGTTCTCCAGATTCTGTAAAAGACAGTACATATAAAGGTAGTGTTCAGAGTCAGATCCCTTATGTAGTCACTGTTAATAATCAAGCTCCTGACGAAATCACAGGTAACGTCAACATCTCCAGATCTATACTTGGGGCTGCTTCTTCTGGTGCAAATTCTGATATAACATCTCTCGAAGGGCTTACAACAGCACTCTCTGTTACTCAGGGTGGGACAGGAGCAAAAAATACCAATGATGCTAAAACCAATCTAGGTGTAGATAGAATGGTTCAAGGTTCTGGGGAGACTAAGATCTTATCTCCGAATAAAGAAACCTACATGTTTGTTGATAACAACGGATGGGGCTGTTACCGTACCACGGCTGGGTTGGTCGGTACTGTAGCTTTGTCAGTTGAAAGAGGGGGCACTGGAGCAACAGATATTGTTAGTGCAAGAGATAATCTAGGACTTAAATCTCTTTCTACATTAGATACTGTTCCAGTAACAAAAGGTGGGACAGGTGCTAGTGATGCTGCGGAGGCTCGGTCTAACTTAGGTTTAGGTTCTGTTGCCACTCTTAGTAACGTACCAATCGCTAGCGGTGGTACAGGTGCTGGTGATGCTGCTGGTGCAAGGTTTAATTTGGGGCTGGGAAGTGTTTCTACTCTTAGTAATGTACCTATTGCTAGCGGTGGGACAGGTGCTAGTGATGCTGCTGGTGCCCGAATCAATATTGGAGCGCTGAGTAACGCCCCAGCAAACACAGGTACAGGTGGTACAGGTGCGCGAGTCCAACATGCCACCGGAAGTGGCCTGTTTACTTTAGACATGTTTAACTGCTACTGGTATATGCAGCCAGAGGATACTAACTTCTGGGTTGCCCACGGTGTGTCATATGCAGGAGCTAATGGCGAAGCCTCAGATTATGGTCGTATATCTTACGCAATAAAGATTGCAGATGGAACAACAAAATATGTCCATTGTCTTACAAACAAAAACACCACTATTGATACAGGTGGATTTATCAAAGCGGCATCTCCGGTAGTTAACATTTATACCAACGGTCAATATGAAACGAATGATGAATCTGAGGGGGTTAGTGTTATCCGGCAGGGTATTGGTGAATATCTGATTACCGGTTGCCTCGGTCTTAACTCTGATGCAAGATGGGGTGGGGTGGATGGGGGGTTTGAAATCCCAACAGATCGCAATAAGCAGCCTAGGATTTGGCTGGACTATGAGGTTAAAGAAGATGGTTCTATTTTAGTTAAAACCTATCACAGAACTCACCCAACCTCTCCAGTTTTTGCTAGAAATGAGATAGAAGGTTTTGCTGATGGAGACCCTATTGATATTCCAAGTGATGCTTTTATCTCAGTTCGTGTAGAGATGCCATCTAAGTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
960475706885c93a27dfd0aa286cc9937c4e5855e859b7b4479949c9d0df32c8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6290
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequences of Escherichia coli phages Huey, Dewey, and Louie Maffei,E., Willi,L. and Harms,A. — — GenBank