Protein

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Genbank accession
QPX75434.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,86
Protein sequence
MAILISGILKDGMSNPMAGYTVLFISKKNTSDVLNTVVGKTVTDNFGAYSINAGVGEYVVAYYREGLETKTAGCIKVLPDSVPGDINSFLTTPGESELTPEIVQAVMNYRNQAQAAAEAAIKAAKDAKLYVDSAVGLQKPYLDIDLAKADITSGIIKDKQVFSVVSPTKKNTYDLWYNNAGVATPILNTDGVQVSYPSTAALDEVLNLVKQSETATHFFEVVDDFEYIGFSISGEDGTINSMDNIILTPNKLQNKKVTIEDNRLDIGSTEITQQDSEYLIYLEDGRGYQLEVSTGANNSGTTPPPENDWQQLIQRNAENIAKANAIFRKRNTFTQPFNCKYNGVIMTSQSLGTGYEGWPAISNVWYENLNNKMLGNSTRPSSRSANEFIPLGNSSLQNLKAVTQSIDGLSILNDSQTSALAPGASNEGESPIVAAVNYLKYLYLEDKGLKSDDNMILVASDTGVAGRTIEQLINILFKRFTDAVDGQMAAAIAAGGDYCVPLIFFMQGEWNYTTAYGGTVDPTEYKAFVNTYFDMVTNYVMTKTGQEKPPAFVIYQTGAGYTNVDDLIKIGKAQFELSQEREGVVMASTVYQETDKGGHLQPNGYANVGARLGYAAFKYCIKRENFVPTHIKNYVAKGKEVLCNVIAYEYPIISKPAYNVVTPMDYLSKGFKPVDSAGINQVTSVEFVADSIIKLNLQREIVGDLWIVYAGKNDYNGNGNICDSSSVLCPYKYVYQEGRGQYPATNIPELVGKPYDMSNWLVANRIQAEVIK
Physico‐chemical
properties
protein length:772 AA
molecular weight: 84507,22670 Da
isoelectric point:4,83520
aromaticity:0,09845
hydropathy:-0,21969

Domains

Domains [InterPro]
IPR013609
ATT
1–128
IPR013609 IPR036514
IPR008969
ATT
5–82
IPR008969 SSF52266
DC_0547
STR
81–754
DC_0547
QPX75434.1
1 772
Architecture
ATT
STR
ATT 1-128 | STR 129-754 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
QPX75434.1
1 772
Domain Start End Length (AA) Confidence
N-terminal 1 494 494 0,8013
Central domain 495 693 200 0,2872
C-terminal 694 772 78 0,6317
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-494
Central
495-693
C-terminal
694-772

Taxonomy

  Name Taxonomy ID Lineage
Phage Serratia phage vB_SmaS_Opt-169
[NCBI] 		2777370 No lineage information
Host No host information

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
QPX75434.1 [NCBI]
Genbank nucleotide accession
MW021767.1 [NCBI]
CDS location
range 14459 -> 16777
strand +
CDS
ATGGCAATTTTAATTTCAGGAATATTAAAAGATGGTATGTCAAACCCTATGGCCGGGTATACCGTTTTATTTATCAGCAAAAAAAATACAAGCGATGTTTTAAACACGGTTGTGGGGAAAACGGTTACTGATAATTTCGGCGCTTATTCCATTAACGCTGGCGTTGGCGAATATGTTGTAGCCTATTATCGTGAAGGGCTTGAAACAAAAACGGCAGGCTGTATTAAGGTTTTGCCTGATTCCGTGCCAGGAGATATTAATTCATTCTTGACCACACCAGGCGAATCAGAATTAACGCCTGAAATTGTTCAAGCCGTGATGAATTATAGAAATCAAGCCCAGGCGGCGGCGGAGGCGGCGATTAAAGCCGCGAAAGATGCAAAGCTCTACGTTGATTCCGCCGTAGGTCTGCAAAAGCCATATCTTGATATTGACCTGGCTAAAGCCGATATTACAAGCGGCATTATCAAAGATAAGCAAGTTTTTTCTGTTGTATCTCCAACAAAAAAAAATACATATGATCTTTGGTATAATAACGCCGGTGTTGCTACGCCAATTTTAAATACTGATGGCGTCCAGGTTTCATATCCATCAACAGCGGCACTTGATGAAGTTTTAAATCTTGTCAAGCAAAGCGAGACGGCAACGCATTTTTTCGAAGTTGTAGATGATTTCGAATATATCGGATTTAGCATTAGTGGCGAGGATGGAACAATAAATTCAATGGACAATATTATATTGACTCCAAACAAGCTACAAAATAAAAAGGTAACTATTGAGGATAACCGCCTTGATATTGGCAGCACCGAAATAACCCAGCAGGATTCAGAATACCTGATTTATCTTGAAGATGGTCGCGGCTATCAACTTGAAGTTTCAACAGGTGCAAATAATTCAGGAACAACCCCGCCGCCGGAAAATGACTGGCAGCAATTAATTCAAAGAAATGCCGAAAACATTGCAAAAGCCAATGCAATTTTCAGAAAAAGGAATACTTTCACTCAGCCATTTAACTGCAAATATAATGGCGTCATAATGACAAGTCAAAGCCTCGGAACTGGATATGAGGGCTGGCCCGCCATTAGTAATGTGTGGTATGAGAATCTTAATAATAAAATGCTCGGCAACTCAACCAGGCCAAGCAGTAGATCGGCAAATGAATTTATTCCGCTTGGAAATTCAAGCCTACAAAATTTAAAGGCCGTCACTCAGTCAATTGATGGCCTGTCAATTCTCAACGATTCACAGACCAGCGCGCTCGCGCCTGGGGCATCAAATGAGGGTGAGTCTCCTATCGTTGCCGCCGTGAATTATTTGAAATATTTATACCTTGAGGATAAAGGGCTTAAATCTGACGACAACATGATTTTAGTTGCCAGTGATACCGGCGTCGCAGGTCGAACGATTGAGCAATTAATTAATATTTTATTTAAAAGATTTACAGATGCTGTTGATGGTCAAATGGCCGCAGCCATTGCGGCAGGCGGTGATTATTGCGTTCCCCTCATTTTCTTCATGCAAGGCGAATGGAACTACACAACAGCATACGGCGGCACTGTTGATCCTACTGAATATAAGGCGTTTGTTAATACATATTTTGACATGGTTACAAATTATGTGATGACAAAAACGGGACAGGAAAAGCCGCCAGCATTTGTCATTTATCAAACCGGTGCTGGCTATACAAACGTGGATGATTTAATAAAAATTGGCAAGGCTCAATTTGAATTAAGTCAAGAACGGGAAGGCGTAGTAATGGCGTCAACCGTATACCAGGAAACGGACAAGGGCGGGCATTTGCAGCCGAATGGCTATGCTAACGTTGGCGCAAGGCTTGGATATGCAGCATTTAAATACTGCATTAAGCGTGAAAATTTTGTGCCAACTCATATTAAAAATTATGTCGCAAAAGGCAAGGAAGTTTTATGCAATGTCATTGCATATGAATATCCTATAATTTCAAAGCCAGCATATAACGTAGTCACGCCTATGGATTACCTGTCAAAAGGATTTAAGCCAGTAGATAGCGCAGGCATTAACCAGGTTACTAGCGTTGAATTTGTGGCGGATTCGATTATAAAATTAAATCTGCAACGCGAGATTGTCGGCGACTTGTGGATTGTTTACGCTGGTAAAAATGATTATAATGGTAATGGCAATATATGCGACTCATCAAGCGTGCTATGCCCGTATAAGTACGTTTACCAGGAGGGGCGCGGTCAGTACCCAGCAACAAATATTCCTGAGCTGGTAGGAAAACCATATGACATGTCAAACTGGCTTGTCGCTAACAGAATTCAAGCAGAGGTGATTAAATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
16f75e001c6fd15e8e667b304ca66a88a56015845769cbe3ba7423c5379300ae
ColabFold
Source ColabFold
Method ColabFold
Resolution 0,2918
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50