Protein

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Genbank accession
YP_007517882.1 [GenBank]
Protein name
curlin-associated protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
Protein sequence
MKTITKIVMFLMMLTMPVMANDIYVTQSGATLDLDILQDGQNNTIGNSTTASTVTGATTTLNIDQVGDSNVLTFDINGATYTGTFDVTGNSNNIDFNCDSAGTVSSCATVTASVVWVGSSNDLDIDIGETADASNAAVTISGASGSDSNVINATIDGTSVILTLSVNGDTNNYLLDIDGDGDSAGHTLIHTHTGSIADVDITQSGIYDNMITLTTSGDNHDIDIIQRD
Physico‐chemical
properties
protein length:228 AA
molecular weight: 23591,47720 Da
isoelectric point:4,05003
aromaticity:0,03947
hydropathy:0,04956

Domains

Domains [InterPro]

No domain annotations available.

Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
YP_007517882.1
1 228
Domain Start End Length (AA) Confidence
N-terminal 1 24 24 0,0009
Central domain 25 217 194 0,8011
C-terminal 218 228 10 0,5099
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-24
Central
25-217
C-terminal
218-228

Taxonomy

  Name Taxonomy ID Lineage
Phage Pelagibacter phage HTVC008M
[NCBI] 		1283076 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Candidatus Pelagibacter ubique HTCC1062
[NCBI] 		335992 Bacteria > Proteobacteria > Alphaproteobacteria > Pelagibacterales > Pelagibacteraceae > Candidatus Pelagibacter

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_007517882.1 [NCBI]
Genbank nucleotide accession
NC_020484 [NCBI]
CDS location
range 8871 -> 9557
strand +
CDS
ATGAAAACAATAACTAAAATAGTTATGTTTTTGATGATGTTAACAATGCCAGTAATGGCAAATGACATTTATGTAACTCAATCTGGTGCTACACTAGATTTAGATATATTACAAGACGGACAAAACAACACAATAGGTAACAGTACCACAGCGTCAACTGTAACAGGTGCTACCACGACTTTAAATATTGACCAAGTTGGTGATAGTAACGTACTAACCTTTGACATTAATGGTGCAACTTATACTGGTACTTTTGATGTAACTGGTAATAGTAACAACATTGATTTCAATTGTGATAGTGCAGGAACAGTTAGTTCATGTGCTACGGTTACTGCCTCTGTTGTATGGGTAGGTTCTTCAAACGACTTAGACATTGACATAGGTGAAACAGCAGACGCTTCAAACGCTGCCGTTACAATATCAGGTGCGTCAGGTAGTGATAGTAATGTTATAAATGCTACAATAGATGGTACAAGTGTTATCCTTACTTTATCAGTAAACGGTGATACTAACAATTACTTACTAGACATAGACGGAGATGGTGATAGTGCAGGACATACACTTATACACACTCACACAGGTTCAATCGCTGATGTAGATATCACACAATCAGGTATCTATGACAATATGATTACACTAACAACTTCAGGTGATAACCACGATATAGATATAATCCAGAGAGACTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
c2ac0003bd418f699711f65df57e79de70cb1566953ddb3a58a96f07dd02c9d8
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,8664
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50