Protein

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Genbank accession
AUR81357.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence Phold
Probability 1,00
TF
Evidence RBPdetect2
Probability 0,54
Protein sequence
MLKCTPIKENITVYEGDDCTLEFVSSLGDITGASIRLQARIDTSSRYAIIDVDGVILDSTKGSYSVTLPSGDTLGKASEDSYHYDVKIIKSDGSIHTDRSGMMTIDARTTDLTTTKTTTVYGVDVDQDGNLLRAKAQQVNFLGAGVKLTSNNQGGVDIEIDRSATAPTLALQFAGIYDDIQALNDAVPKPSEHMQAIVIQPSEYYYHVVGSSWQQLAPVGSFHPKYLGAYDTVIDLRVAEPTPDDDSLAIVGTTSKTFYVYESGKWDIVNHADIPGLDARLTTQENKMVTTQKDVSDLQTVSGKNTSDIAALYAPDKATFDAKLDARLVKPEADISALQASTAQIQAAQTSSEKIVTDNTKRLGTAEQHLQTLQSNDQKHDSEISAIGNDITQLQGQVYDGNDISDDDGNSLSDITGLKFVGAQVSDDDGDRTATVTVSPKITVADGQQPGSHSEMGNAIVFEGSQVSADPNDPNVIKVAVHATSHNGITLGDGANASREVQTILFNGHQAYGSGTTAEIHIEFVHFKTIAERDAWTAKFSTHMDFDVIALVDADENGFVAYYKFDAATKVWLEYDAQAVVMHERSSCS
Physico‐chemical
properties
protein length:589 AA
molecular weight: 63449,21800 Da
isoelectric point:4,53998
aromaticity:0,06621
hydropathy:-0,32377

Domains

Domains [InterPro]
DC_1236
ATT
3–310
DC_1236 G3DSA:1.20.5.340 DC_0389
G3DSA:1.20.5.340
STR
313–402
G3DSA:1.20.5.340
AUR81357.1
1 589
Architecture
ATT
STR
STR
ATT 3-310 | STR 311-402 | STR 459-588 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Vibrio phage 1.004.O._10N.261.54.A2
[NCBI] 		1881288 No lineage information
Host Vibrio lentus
[NCBI] 		136468 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Vibrionales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AUR81357.1 [NCBI]
Genbank nucleotide accession
MG592391.1 [NCBI]
CDS location
range 6953 -> 8722
strand +
CDS
ATGCTTAAATGCACGCCAATTAAAGAAAACATAACAGTATATGAAGGTGATGATTGCACACTAGAGTTCGTCTCGTCTCTTGGTGACATCACTGGTGCAAGTATCCGACTGCAAGCCAGAATTGACACTTCTTCACGTTACGCAATTATTGACGTAGACGGTGTCATCCTTGATTCAACTAAAGGTTCGTACTCTGTCACACTCCCTAGTGGTGACACTCTAGGTAAAGCGTCTGAAGATTCTTACCATTACGACGTCAAAATAATCAAAAGCGATGGTTCAATACATACTGACCGCAGCGGTATGATGACGATTGATGCTCGTACCACCGATTTAACCACTACTAAAACCACCACTGTTTACGGGGTGGATGTCGACCAAGACGGTAACCTCCTAAGAGCTAAAGCTCAGCAAGTCAACTTCCTCGGTGCAGGGGTTAAATTAACCTCAAACAACCAGGGTGGTGTTGACATTGAGATTGACCGTTCTGCTACAGCTCCTACCCTGGCTCTACAGTTCGCAGGTATTTACGACGACATTCAAGCTTTGAATGATGCCGTACCTAAACCTAGTGAGCACATGCAAGCCATAGTCATTCAACCTAGTGAGTATTACTATCATGTCGTAGGCAGTTCATGGCAACAGTTAGCACCTGTAGGTTCATTCCACCCTAAATATTTAGGTGCGTATGACACCGTGATTGACCTAAGAGTTGCGGAACCGACACCTGATGATGACTCGTTAGCTATAGTGGGTACAACCAGTAAAACGTTCTATGTGTACGAGTCTGGTAAGTGGGATATTGTGAATCACGCTGACATACCAGGGCTTGACGCTAGGTTGACCACTCAAGAAAATAAAATGGTTACGACTCAAAAAGACGTATCCGACCTACAAACCGTATCAGGTAAGAATACTTCTGACATTGCCGCTTTGTACGCTCCTGATAAAGCCACGTTTGACGCTAAGCTTGATGCACGTCTAGTTAAGCCTGAAGCAGACATAAGTGCGTTACAGGCCAGTACAGCTCAAATTCAAGCCGCGCAGACATCATCTGAGAAGATTGTTACCGACAACACTAAACGACTCGGTACAGCTGAGCAGCACTTACAGACTCTACAGTCGAATGACCAGAAACATGACAGTGAGATATCTGCTATCGGTAACGACATCACTCAGCTTCAGGGTCAGGTTTATGACGGTAACGACATTAGTGACGACGACGGTAACTCATTATCTGACATCACAGGTTTGAAGTTCGTAGGTGCTCAGGTGTCTGACGATGACGGTGATAGAACAGCAACAGTGACAGTGTCACCTAAAATCACTGTGGCCGACGGTCAACAACCCGGTAGTCATTCAGAGATGGGTAACGCGATTGTATTCGAAGGGTCACAAGTGTCAGCTGACCCGAATGACCCGAATGTGATTAAAGTTGCTGTTCACGCAACCAGTCACAATGGAATCACACTGGGTGACGGTGCAAACGCGAGTCGTGAAGTGCAGACTATTCTGTTCAACGGCCATCAAGCATATGGTTCAGGTACTACTGCTGAGATTCACATTGAGTTCGTCCACTTTAAAACGATTGCTGAGCGTGATGCCTGGACTGCTAAATTTAGCACCCATATGGATTTCGATGTCATTGCTTTAGTTGATGCTGACGAGAACGGTTTCGTTGCTTATTATAAGTTTGATGCAGCAACTAAAGTGTGGTTAGAGTATGACGCTCAAGCTGTCGTAATGCACGAACGCTCAAGCTGTTCTTGA

Genome Context

Genome Context

Tertiary structure

PDB ID
65df40fde9ac27f24cb52143189927a39f607f802a989a9b488c2f0b41945b06
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7006
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A major lineage of nontailed dsDNA viruses as unrecognized killers of marine bacteria Kauffman,K.M., Hussain,F.A., Yang,J., Arevalo,P., Brown,J.M., Chang,W.K., VanInsberghe,D., Elsherbini,J., Cutler,M.B., Kelly,L. and Polz,M.F. 2018-01-24 — GenBank