Protein

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Genbank accession
WCZ57484.1 [GenBank]
Protein name
hypothetical protein
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect
Probability 0,91
Protein sequence
MSFFAGKLNNKSILSLRRGSGGDVNIHINPDSQTIFHSDMPHVIITETHSTGLRLDQGAGDYYWSNMPSRITQLHNNDPNRVVLTEIEFSDGSRHMLSGMSMGVGAKAYGIINPQVMSQGGLKTQITASADLSLDVGYFNSGTSGTIPQKLRDGTGCQHMFGAFSGRRGFASSAMYLGGAALYKSAWDGSGYVVPDAGTLTIPSDYVRHPGARNFGFNAIYVRGRSCNRVLYGMEGPNYTTAGAVHGASSSGALKFMSNPSNPSAPKYSVGFARADPTNYAYWESMGDPNNAANGPIGIYSEHLGIYPSKITWYVTNLVYNGSGYSIDSGLFTGNDIKLSPREFIIKGVNVNNTSWKFINFVEKNFNVGSRADFRDVGCNLSKGSPSTGISGIATFGLPTTESNNAPSIKGGNVGGLHTNVVSIYNFLPSASWYVSSNPPKIGSNYGDVWSENLLPLRLLGGSGSTVLSGNVVFQGNGSVHVGTVGLGLNSSRNGAIVCTMEFLDDTWLSAGGIGCFNPTEMLSKGANYGDSRFRMGGNTTNKKLHQILSLPAGEYVPFFTIKGTVVNACKLQAAGYTPTPYWVSGLPGSVGQTGYYTLTYYMRNDGNNNISIWLESSMSNIIGMKACLPNIKLIIQRLT
Physico‐chemical
properties
protein length:640 AA
molecular weight: 68445,16660 Da
isoelectric point:8,97724
aromaticity:0,10312
hydropathy:-0,18547

Domains

Domains [InterPro]
IPR059609
RBD
1–640
IPR059609
WCZ57484.1
1 640
Architecture
RBD
RBD 1-640
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
WCZ57484.1
1 640
Domain Start End Length (AA) Confidence
N-terminal 1 158 158 0,0378
Central domain 159 357 200 0,1187
C-terminal 358 640 282 0,9653
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-158
Central
159-357
C-terminal
358-640

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage Kenya-K20
[NCBI] 		3027609 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Salmonella enterica
[NCBI] 		28901 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WCZ57484.1 [NCBI]
Genbank nucleotide accession
OQ291032 [NCBI]
CDS location
range 103309 -> 105231
strand -
CDS
ATGAGTTTTTTCGCTGGTAAGCTAAATAACAAATCTATACTCTCACTGCGCAGGGGTAGTGGTGGTGATGTTAACATACATATTAATCCTGACTCTCAAACAATATTTCATTCAGATATGCCCCATGTAATTATAACGGAAACTCATTCCACAGGGTTAAGACTAGATCAAGGTGCTGGAGACTACTATTGGTCTAATATGCCTAGCAGAATTACCCAGTTACATAATAATGATCCTAACAGGGTAGTACTAACTGAGATTGAGTTTTCAGATGGCTCTAGACATATGTTATCCGGTATGTCTATGGGGGTAGGCGCAAAAGCCTATGGTATTATAAATCCACAGGTCATGTCCCAGGGCGGGTTAAAAACACAAATAACAGCTAGTGCTGATCTATCTCTTGATGTAGGCTATTTTAATAGTGGTACTAGTGGTACGATCCCCCAGAAGCTTAGAGATGGTACTGGATGTCAGCATATGTTTGGAGCCTTTAGTGGACGTAGAGGGTTTGCCTCTAGTGCAATGTACTTAGGGGGTGCTGCTCTTTATAAGTCTGCCTGGGATGGTTCAGGATATGTAGTGCCGGATGCAGGAACCCTAACTATCCCTAGCGACTACGTTAGGCATCCCGGAGCTAGAAACTTTGGATTTAATGCCATATATGTTCGTGGAAGGTCTTGTAATAGAGTTCTTTACGGTATGGAGGGGCCTAACTATACTACTGCTGGAGCCGTGCACGGTGCTTCTAGTTCTGGGGCTCTTAAATTTATGTCTAATCCTAGCAATCCCTCGGCCCCTAAGTACTCTGTAGGTTTCGCACGTGCTGATCCCACTAACTATGCGTATTGGGAAAGTATGGGTGATCCGAACAATGCTGCTAATGGGCCCATAGGTATATATAGTGAGCACCTCGGTATTTACCCATCTAAAATTACTTGGTATGTTACCAATCTAGTATATAATGGTTCAGGATATAGTATTGATAGTGGGCTATTTACTGGCAATGATATTAAGCTTAGTCCAAGAGAATTTATTATTAAAGGGGTTAACGTTAATAATACATCATGGAAATTTATTAACTTTGTTGAGAAAAACTTTAATGTAGGGAGCAGAGCTGATTTTCGTGATGTTGGGTGTAACTTGAGTAAAGGTTCTCCATCCACAGGAATATCAGGTATAGCAACATTTGGACTGCCAACCACAGAGAGCAATAATGCTCCTAGTATTAAAGGCGGTAATGTTGGTGGCTTACATACTAATGTAGTTAGTATTTATAACTTTTTACCTTCAGCATCTTGGTATGTTTCTAGTAATCCTCCAAAAATAGGCAGCAATTATGGAGATGTTTGGAGTGAGAATCTTTTACCTTTAAGACTTCTAGGTGGTAGCGGGAGTACTGTACTATCTGGTAATGTAGTGTTTCAGGGTAATGGATCTGTACATGTTGGTACCGTGGGGCTAGGTCTTAATAGTAGTAGAAATGGTGCAATTGTATGTACTATGGAGTTCCTGGATGACACATGGTTGTCTGCAGGAGGTATTGGTTGCTTTAACCCTACGGAAATGTTATCTAAAGGTGCTAACTATGGCGATAGTAGGTTCAGAATGGGGGGGAATACAACAAATAAAAAACTTCACCAAATATTGTCTCTACCTGCAGGAGAATATGTTCCATTTTTTACTATTAAAGGTACTGTAGTAAACGCCTGTAAATTACAGGCTGCTGGGTATACTCCAACTCCGTACTGGGTATCTGGGTTGCCGGGATCCGTAGGTCAAACCGGTTACTATACTCTAACATACTATATGAGAAATGATGGAAATAATAATATCTCTATTTGGTTAGAATCCTCTATGAGTAATATAATTGGCATGAAAGCATGCTTACCAAATATTAAACTTATAATTCAACGCCTTACCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
bf3c601fba3e78b2995036985b35ef4be7cdf5c5c7aa289fe1716afb07c4fd43
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,2724
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Whole genome sequence of Salmonella phage Kenya-K20 Gunathilake,D., Makumi,A., Loignon,S., Trembley,D., Labrie,S., Svitek,N. and Moineau,S. 2024-01-11 — GenBank