Protein

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Genbank accession
WPK38502.1 [GenBank]
Protein name
tail fiber protein
RBP type
TF
Evidence GenBank
Probability 1,00
TF
Evidence Phold
Probability 1,00
Protein sequence
MVNISGFGTSIRIVALQSFPVGLNISSLSDDQDSLIIEEVESVGYQLTYDGGICIYDKAAVVRVSIAVIPNTEDDINLKLLLSARKGGFKWLPIQDVTSMLITYPDGGRVAFSNGTIISGPLGDSIEQSGRRKTNRYTFVFASYGGAQSTSQIAKGVVQSILGSI
Physico‐chemical
properties
protein length:165 AA
molecular weight: 17612,82780 Da
isoelectric point:5,03260
aromaticity:0,07879
hydropathy:0,18424

Domains

Domains [InterPro]
IPR054440
STR
3–144
IPR054440
WPK38502.1
1 165
Architecture
STR
STR 3-144 |
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Escherichia phage AV128
[NCBI] 		3077273 Viruses > Duplodnaviria > Heunggongvirae > Uroviricota > Caudoviricetes
Host Escherichia coli
[NCBI] 		562 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
WPK38502.1 [NCBI]
Genbank nucleotide accession
OR352958.1 [NCBI]
CDS location
range 52307 -> 52804
strand -
CDS
ATGGTCAATATTAGTGGATTTGGCACAAGCATTAGAATTGTCGCTCTCCAATCTTTCCCTGTTGGGCTGAATATCAGTTCTTTGTCTGATGACCAGGATTCGCTAATTATTGAGGAAGTTGAATCAGTAGGCTATCAACTTACTTACGACGGCGGCATTTGTATTTATGACAAGGCCGCCGTCGTTCGCGTATCCATTGCGGTGATCCCAAACACTGAAGATGACATAAACCTAAAGCTTTTGCTTTCCGCTCGTAAAGGCGGATTCAAGTGGCTTCCTATACAGGATGTCACATCAATGCTTATTACATATCCTGATGGCGGCAGAGTAGCATTTTCGAACGGGACCATCATCAGCGGTCCGCTTGGCGACTCCATTGAGCAGTCCGGTCGTCGTAAGACAAACAGATACACATTCGTGTTTGCCAGCTACGGCGGCGCACAGAGCACATCGCAAATTGCAAAAGGCGTGGTGCAGAGCATATTGGGGTCAATTTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
a27ac1f122984d554453362473a14c64cea5146200131efd5bce706cf8eae36c
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,6875
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
A collection of diverse bacteriophages for biocontrol of ESBL- and AmpC-beta-lactamase-producing E. coli Vitt,A.R., Sorensen,A.N., Bojer,M.S., Bortolaia,V., Sorensen,M.C.H. and Brondsted,L. 2023 — GenBank