Protein

View in Explore
Genbank accession
YP_009849665.1 [GenBank]
Protein name
tail protein
RBP type
TF
Evidence UniProt/TrEMBL
Probability 1,00
TF
Evidence GenBank
Probability 1,00
TF
Evidence RBPdetect
Probability 0,77
TF
Evidence RBPdetect2
Probability 0,83
Protein sequence
MAVTTKIIVQQILNIDDTKATASKFPRYTVILGNSISSITASELVSSIEAAAKSAAAAKDSEIAAKTSELNAKNSEQEAAISAGASEASATQSATSATQSATSATKSAESASAAKTSETKAKTSETNAKTSETKAKASETNAASSATSASQSVTTIQGLKSDVEQLKSDTQAIKNSAVTETTAIKADVAQLKTDTQGIKNSAITETTSLKNQAATSATSAANSATEAGKQATNAANSASTAKTEADRSKTEADRSEAAANSTPDIQPLPDVWIPFNDSLDMITGFASGYKKITVGDEEITMPSDKIVSFTRASTATYINKSGVLAVAEIDEPRFERDGLLIEGQRTNLLINSTNPTKWNKSSNMILDRSGVDDFGFQYAKFTLKPEMVGQTSAINIVTVSGSKGFDVTGNEKYVTISCRAQSGTPNLRCRLRFENYDGSAYTFLGDAYLNMTDLSIEKTGGAANRITARAVKDEASKWIFFEATIKALDTENMIGAMVQYAPAKGGGTGVDDYIYIATPQVEGGACASSFIITEATPVTRASDMVTMPIKNNLYNLPFTVLVEANKNWSITPNAAPRVFDTRGHQSGAAIILAFGSAEGDNDGFPYCDIGKSNRRVYENAKLKKMIMGMRVKSDYNNCCVSNARISSETKTEWRYIQSTATIRIGGQTNTGERHLFGHIRNFRIWHKELTDRQMKEYV
Physico‐chemical
properties
protein length:698 AA
molecular weight: 74535,25220 Da
isoelectric point:6,54486
aromaticity:0,06160
hydropathy:-0,38123

Domains

Domains [InterPro]
DC_0608
ATT
2–204
DC_0608
G3DSA:1.20.5.1700
Unmapped
141–219
G3DSA:1.20.5.1700
Coil
Unmapped
156–176
Coil DC_0353
YP_009849665.1
1 698
Architecture
ATT
STR
ATT 2-204 | STR 205-698
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Taxonomy

  Name Taxonomy ID Lineage
Phage Salmonella phage VSe12
[NCBI] 		2847284 Uroviricota > Caudoviricetes > Demerecviridae > Tequintavirus > Tequintavirus VSe12
Host Salmonella enteritidis
[NCBI] 		149539 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
YP_009849665.1 [NCBI]
Genbank nucleotide accession
NC_048794 [NCBI]
CDS location
range 83546 -> 85642
strand -
CDS
ATGGCAGTAACTACTAAAATTATTGTGCAACAAATACTGAATATAGATGATACAAAGGCTACTGCTAGTAAATTTCCTAGATACACAGTAATTCTTGGAAATTCTATTAGTTCTATTACTGCTAGTGAGTTAGTATCTTCTATAGAGGCTGCTGCTAAATCTGCTGCGGCTGCTAAAGATTCTGAAATAGCAGCTAAGACTTCAGAGCTTAATGCTAAGAACTCTGAACAGGAAGCTGCTATTTCTGCTGGAGCTTCTGAAGCTTCTGCTACTCAGTCTGCTACCTCTGCTACTCAGTCTGCCACTTCTGCTACTAAATCTGCAGAATCAGCGTCTGCTGCAAAAACCTCCGAAACAAAGGCTAAAACTAGCGAAACTAACGCAAAAACTAGTGAGACTAAAGCCAAAGCTAGTGAGACTAACGCAGCTAGTTCCGCAACTTCAGCTAGTCAGTCAGTAACTACTATACAAGGCTTAAAATCAGATGTTGAGCAACTAAAATCAGATACTCAGGCCATTAAAAACAGTGCTGTAACAGAGACAACAGCTATAAAGGCAGATGTTGCGCAGTTAAAAACAGACACACAAGGCATTAAGAATAGCGCGATAACAGAAACTACCTCGCTAAAAAACCAAGCTGCAACTTCTGCAACTAGTGCTGCTAATTCTGCTACTGAAGCAGGAAAACAAGCTACTAATGCTGCCAATAGTGCTAGTACTGCTAAAACTGAAGCCGACCGTTCAAAAACTGAGGCTGATAGATCAGAAGCTGCTGCTAATTCTACCCCCGACATTCAACCTCTTCCAGATGTATGGATACCGTTTAACGATTCTCTAGATATGATTACTGGTTTTGCATCTGGTTATAAAAAAATAACAGTCGGTGATGAGGAAATAACAATGCCTAGTGACAAGATTGTTAGCTTTACACGTGCATCAACTGCGACATATATTAATAAATCAGGTGTATTAGCTGTTGCGGAGATTGACGAGCCGCGATTTGAACGAGATGGGTTGTTAATTGAAGGGCAAAGAACTAACCTGCTAATCAACTCAACCAATCCGACTAAATGGAACAAGTCGTCAAATATGATCTTAGATAGATCAGGTGTAGATGATTTCGGATTCCAGTACGCAAAATTTACATTAAAACCAGAAATGGTAGGGCAAACTTCAGCGATTAACATAGTAACCGTTTCCGGTAGTAAAGGTTTTGATGTAACAGGAAATGAAAAGTATGTAACCATATCATGCAGGGCGCAAAGTGGGACTCCAAATTTAAGATGCCGATTACGATTTGAAAACTACGATGGTTCTGCTTATACATTTTTGGGTGATGCTTACCTAAATATGACAGATCTATCGATTGAAAAAACTGGCGGCGCTGCAAATCGTATTACTGCAAGGGCTGTTAAAGATGAAGCAAGCAAATGGATTTTCTTTGAGGCAACAATTAAAGCACTTGATACAGAAAATATGATCGGTGCAATGGTGCAGTATGCACCAGCAAAAGGGGGAGGTACTGGTGTAGATGATTATATTTATATTGCGACCCCTCAAGTTGAAGGCGGGGCATGTGCTTCATCCTTTATTATTACAGAAGCAACTCCAGTGACAAGGGCTAGTGATATGGTTACAATGCCAATCAAAAACAACCTTTACAATTTGCCGTTTACAGTACTTGTGGAAGCTAATAAAAACTGGAGTATAACGCCAAATGCTGCGCCTCGTGTTTTCGATACTAGAGGTCATCAATCTGGCGCGGCAATTATTCTTGCTTTCGGATCTGCCGAAGGCGATAATGATGGATTCCCTTATTGCGATATAGGTAAATCAAACAGAAGGGTTTACGAGAATGCAAAACTAAAAAAGATGATCATGGGAATGAGAGTAAAGAGTGATTACAATAATTGCTGTGTAAGTAATGCCAGAATATCAAGCGAAACAAAAACGGAATGGAGATACATACAATCAACGGCTACTATAAGGATTGGAGGACAAACAAATACTGGAGAACGACATTTATTTGGCCATATCCGAAACTTTAGAATCTGGCATAAGGAACTAACTGATAGACAAATGAAGGAGTATGTATGA

Genome Context

Genome Context

Tertiary structure

PDB ID
4d8b67ae75270b55445ccd706806d96e0859810271400d146b51104193661f4e
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,7752
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Complete genome sequence of Salmonella bacteriophage VSe12 Denisenko,E., Volozhantsev,N., Kislichkina,A., Verevkin,V., Myakinina,V. and Krasilnikova,V. 2018-05-24 — GenBank