Protein

View in Explore
Genbank accession
AGY36935.1 [GenBank]
Protein name
tail tubular protein B
RBP type
TSP
Evidence DepoScope
Probability 1,00
TSP
Evidence RBPdetect2
Probability 0,58
Protein sequence
MALISQSVKNLKGGISQQPNILRFPEQGSEQINGWSSETEGLQKRPPFVFTKTIGDQNALGAKPLVHLINRDSVEQYYVVFTGQGVRVFDLNGKEYAVKGDLSYVKVGNPRDDLRMVTVADYTFIVNRNMVVRADKTPLYTLKENGDCLINVRGGQYGRTLAFTINNVRIEYKIAQGDKPEHVQETDAQWLVKKLAGLARAHGSFKDWKFNEGSGFIHVIAPGNSQINQLSTEDGYANQLMNAVMHTSQSFSKLPIEAPNGYTVKIVGDTSKTSDMFYVQYDNVKKVWKEVAGWGVEKGLNGDTMPHALVRQPDGSFAMQVLPWAQRSCGDMDTNPTPSIVDQKINDVFFFRNRLGFLAGENIVMSRTSKYFSLFPASVANLSDDDPIDVAVSHNRISILKYAVPFSEELLLWSDQAQFVLSASGILSPKSVELNLTTEFDVSDRARPYGVGRGVYFASPRASYTSLNRYYAVQDVSSVKSAEDMSAHVPSYIPNGVFSIRGSGTENFISVLSANAPSKIFLYKFLYLNEEIAQQAWSHWELGSNVTVLACDSIGSTMYLVLRNQSHTWMCRAHFTKNSIDFHDEPYRLYIDNKVKHVIPKGAYNDDTYTTTIKPVDIYGMKYWKGKFYIVASDGLVSWFEPPRGGWPNGVPVLSMSGNREGETIYIGLAIDFRYVFSKFLIKKTADDGSTATEDIGRLQLRRAWVNYEDSGAFTVEVENTSRLFSYDMAGARLGSNALRSGGLNVGTGQFRFPVAGNAQLNEVRIISDHTTPLNVIGCGWEGNYLRRSSGI
Physico‐chemical
properties
protein length:792 AA
molecular weight: 88269,63030 Da
isoelectric point:7,22704
aromaticity:0,11111
hydropathy:-0,28523

Domains

Domains [InterPro]
IPR058003
TTP
1–792
IPR058003
AGY36935.1
1 792
Architecture
TTP
TTP 1-792
Legend: ATT STR RBD CBM LEC ENZ CHP LNK TAS TTP UNK Unmapped

Tail Spike Domain Segmentation

Tail Spike Domain Segmentation

This protein has been segmented into three structural domains: N-terminal, central domain, and C-terminal.

Domain Layout
N-terminal
Central
C-terminal
AGY36935.1
1 792
Domain Start End Length (AA) Confidence
N-terminal 1 140 140 0,9945
Central domain 141 343 204 0,1036
C-terminal 344 792 448 0,2616
Legend: N-terminal Central domain C-terminal
3D Structure with Domain Coloring

The structure is colored according to the domain segmentation: N-terminal (blue), Central (green), C-terminal (pink).

Domain Coloring
N-terminal
1-140
Central
141-343
C-terminal
344-792

Taxonomy

  Name Taxonomy ID Lineage
Phage Erwinia phage FE44
[NCBI] 		1407608 Uroviricota > Caudoviricetes > Autographivirales > Studiervirinae > Berlinvirus
Host Erwinia sp.
[NCBI] 		558 cellular organisms > Bacteria > Pseudomonadati > Pseudomonadota > Gammaproteobacteria > Enterobacterales

Coding sequence (CDS)

Coding sequence (CDS)
Genbank protein accession
AGY36935.1 [NCBI]
Genbank nucleotide accession
KF700371 [NCBI]
CDS location
range 23431 -> 25809
strand +
CDS
ATGGCTCTTATTTCACAATCCGTCAAGAACCTGAAGGGCGGTATCAGTCAACAGCCGAACATCTTAAGGTTCCCCGAACAGGGTTCCGAACAGATTAACGGTTGGTCTTCGGAGACTGAGGGTCTTCAGAAGCGTCCACCTTTTGTCTTCACTAAGACCATTGGAGACCAGAATGCCCTTGGTGCCAAACCTCTCGTTCACCTCATCAACCGAGATAGTGTCGAACAGTATTACGTAGTGTTTACCGGACAGGGTGTTCGAGTGTTCGACCTCAATGGTAAAGAGTATGCTGTGAAGGGTGACTTGTCCTACGTGAAGGTAGGGAACCCTCGTGACGACCTGCGAATGGTAACGGTGGCTGACTACACGTTTATCGTTAACCGAAACATGGTTGTGCGTGCCGATAAGACACCGCTCTATACTCTGAAAGAGAACGGAGACTGTTTGATTAACGTTCGTGGTGGACAGTATGGGAGAACACTTGCATTCACAATAAACAACGTTCGAATTGAGTACAAGATTGCACAAGGTGACAAGCCTGAACATGTACAAGAGACCGATGCACAGTGGCTCGTTAAGAAACTGGCAGGTCTTGCTCGTGCTCATGGTTCCTTCAAGGACTGGAAGTTCAACGAAGGGTCTGGCTTCATCCACGTAATCGCTCCGGGTAACAGTCAGATTAACCAGTTGTCCACTGAGGATGGCTACGCCAACCAGTTGATGAACGCGGTAATGCACACAAGCCAGTCATTCAGTAAGTTGCCAATCGAGGCTCCTAATGGGTACACTGTGAAGATTGTTGGTGACACCTCTAAGACTTCCGACATGTTCTATGTCCAGTATGACAACGTGAAGAAAGTCTGGAAGGAAGTCGCCGGATGGGGAGTTGAGAAGGGTCTCAATGGTGACACTATGCCACATGCTTTGGTGCGCCAACCAGATGGCTCATTCGCTATGCAGGTTCTACCGTGGGCACAGCGCTCATGTGGGGACATGGACACTAACCCGACTCCTTCTATCGTAGACCAGAAGATTAACGATGTGTTCTTCTTCCGTAACCGCTTAGGGTTCCTCGCTGGTGAGAACATTGTGATGTCCCGTACCTCCAAGTATTTCTCACTGTTCCCTGCGTCAGTGGCTAACCTGTCAGATGATGACCCGATTGATGTGGCTGTATCCCACAACCGTATCTCAATCCTGAAGTATGCCGTACCGTTCTCCGAAGAGTTGCTGCTATGGTCTGACCAAGCACAGTTCGTTCTGTCTGCCTCTGGTATCCTCTCACCGAAGTCTGTAGAGTTGAACCTTACGACTGAGTTCGATGTGTCCGACCGCGCACGCCCTTATGGTGTTGGTCGTGGTGTGTACTTTGCGTCACCTCGTGCCTCTTATACATCACTGAACCGCTACTATGCTGTACAGGACGTAAGCTCCGTTAAGTCTGCTGAGGATATGAGCGCTCACGTTCCAAGCTACATCCCCAACGGTGTGTTCTCCATTCGTGGTTCTGGTACTGAGAACTTTATCTCCGTGCTCTCTGCTAACGCCCCAAGTAAAATCTTCCTGTACAAATTCCTGTACCTGAACGAAGAGATTGCACAACAGGCGTGGTCACATTGGGAACTTGGAAGTAACGTAACGGTTCTGGCTTGTGACTCTATCGGCTCAACGATGTACCTTGTGTTGCGCAATCAGTCACACACTTGGATGTGCCGAGCACACTTTACGAAAAACAGCATTGACTTCCATGATGAACCATATCGCCTGTACATTGACAACAAGGTGAAGCATGTGATTCCTAAAGGTGCCTACAACGATGACACTTACACGACCACTATCAAGCCTGTGGACATCTACGGGATGAAGTATTGGAAGGGTAAGTTCTACATCGTAGCATCTGACGGTCTGGTCTCGTGGTTCGAGCCACCTCGTGGTGGTTGGCCTAATGGTGTCCCTGTGTTGTCAATGAGTGGGAACCGAGAGGGTGAGACTATTTACATTGGGTTGGCTATAGACTTCCGTTATGTGTTCTCTAAGTTCCTCATCAAGAAGACTGCTGATGATGGCTCGACAGCTACCGAGGACATTGGGCGCTTGCAGCTACGCCGAGCGTGGGTGAACTATGAGGACTCTGGTGCATTCACTGTAGAAGTGGAGAACACCTCTCGACTGTTCAGCTACGACATGGCGGGTGCTCGCTTGGGTTCCAATGCGTTACGCTCTGGTGGGCTTAATGTTGGTACTGGTCAGTTCCGCTTCCCGGTCGCTGGCAACGCACAGTTGAATGAAGTACGTATTATCTCTGACCATACTACGCCACTGAACGTTATTGGTTGTGGCTGGGAGGGTAATTACCTGCGTCGTTCTTCTGGTATCTAA

Genome Context

Genome Context

Tertiary structure

PDB ID
dd4547032a3e345b9aaa3af1669ce226bb395d075725df4e940d6e45beaf81f4
ESMFold
Source ESMFold
Method ESMFold
Resolution 0,9043
Oligomeric State monomer
Download PDB
Model Confidence
Very high
pLDDT > 90
High
90 > pLDDT > 70
Low
70 > pLDDT > 50
Very low
pLDDT < 50

Literature

Title Authors Date PMID Source
Molecular genetics of polyvalent Erwinia phage FE44, a novel member of T7 phage group Faidiuk,I.V., Tovkach,F.I., Kushkina,A.I., Kropinski,A.M., Gorb,T.I. and Romaniuk,L.V. 2023-05 — GenBank